Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 OR8F1P-201ENST00000425243 930 ntBASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 MRPS18BP2-201ENST00000434310 759 ntBASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 RPL21P112-201ENST00000434403 463 ntBASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 RPL23AP23-201ENST00000452590 471 ntBASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 MTND3P4-201ENST00000453537 303 ntBASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 AC008565.1-201ENST00000509046 885 ntBASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 AC083923.1-201ENST00000523708 376 ntBASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 AL389895.1-201ENST00000554127 252 ntBASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 AC006960.3-201ENST00000561845 705 ntBASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 AC015726.1-201ENST00000602353 681 ntBASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 AC125494.3-201ENST00000602759 455 ntBASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 AC005229.3-201ENST00000603438 323 ntBASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 AC018926.3-201ENST00000618841 406 ntBASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 AF001550.2-201ENST00000636643 217 ntBASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 AL732372.2-225ENST00000642124 456 ntBASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCNB1IP1Q9NPC3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CCNB1IP1Q9NPC3 PABPC1P7-201ENST00000413177 1513 ntBASIC3.4□□□□□ -1.86
CCNB1IP1Q9NPC3 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CCNB1IP1Q9NPC3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 MIR372-201ENST00000362225 67 ntBASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 RNU6-1243P-201ENST00000364028 107 ntBASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 SNORA7.2-201ENST00000364446 145 ntBASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 RNA5SP235-201ENST00000365411 114 ntBASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 SKINT1L-201ENST00000401057 817 ntBASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 MTCO3P31-201ENST00000405526 789 ntBASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 ZNF602P-201ENST00000405929 924 ntBASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 AP000567.1-201ENST00000406413 156 ntBASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 HMGB3P31-201ENST00000413333 595 ntBASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 AL513175.1-201ENST00000431492 780 ntBASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 OR4C10P-201ENST00000434991 931 ntBASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 RPL21P89-201ENST00000444021 467 ntBASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 AC008280.2-201ENST00000455473 307 ntBASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 RN7SL330P-201ENST00000469709 307 ntBASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 AP000893.1-201ENST00000474462 794 ntBASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 TPT1P3-201ENST00000492841 512 ntBASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 FCF1P3-201ENST00000496394 590 ntBASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 AC020893.1-201ENST00000502452 580 ntBASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 AC010460.1-201ENST00000507087 466 ntBASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 FTH1P21-201ENST00000512179 511 ntBASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 RNA5SP208-201ENST00000516156 78 ntBASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 RNA5SP164-201ENST00000516533 110 ntBASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 YPEL5P3-201ENST00000547227 352 ntBASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 AL121766.1-201ENST00000547436 487 ntBASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 AC007224.1-201ENST00000564410 144 ntBASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 MIR4286-201ENST00000580651 93 ntBASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 MIR4697-201ENST00000582977 78 ntBASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 AC135178.6-201ENST00000605314 398 ntBASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.4□□□□□ -1.87
CCNB1IP1Q9NPC3 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCNB1IP1Q9NPC3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCNB1IP1Q9NPC3 AC046144.1-201ENST00000478559 1853 ntBASIC3.39□□□□□ -1.87
CCNB1IP1Q9NPC3 MTND5P28-201ENST00000438005 1594 ntBASIC3.39□□□□□ -1.87
CCNB1IP1Q9NPC3 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.39□□□□□ -1.87
CCNB1IP1Q9NPC3 RNA5SP283-201ENST00000365604 119 ntBASIC3.39□□□□□ -1.87
CCNB1IP1Q9NPC3 SNORA51.12-201ENST00000384448 134 ntBASIC3.39□□□□□ -1.87
CCNB1IP1Q9NPC3 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CCNB1IP1Q9NPC3 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.39□□□□□ -1.87
CCNB1IP1Q9NPC3 AC092745.2-202ENST00000411880 369 ntBASIC3.39□□□□□ -1.87
CCNB1IP1Q9NPC3 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.39□□□□□ -1.87
CCNB1IP1Q9NPC3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.39□□□□□ -1.87
CCNB1IP1Q9NPC3 CR848007.2-201ENST00000424918 787 ntBASIC3.39□□□□□ -1.87
CCNB1IP1Q9NPC3 YWHAZP8-201ENST00000436935 731 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms