Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.32□□□□□ -1.56
VTA1Q9NP79 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.32□□□□□ -1.56
VTA1Q9NP79 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.32□□□□□ -1.56
VTA1Q9NP79 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.32□□□□□ -1.56
VTA1Q9NP79 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.32□□□□□ -1.56
VTA1Q9NP79 AL831737.1-201ENST00000441288 271 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 TRIM60P18-201ENST00000441518 828 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.32□□□□□ -1.56
VTA1Q9NP79 VN1R10P-201ENST00000447106 875 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC5.32□□□□□ -1.56
VTA1Q9NP79 VN1R32P-201ENST00000452234 905 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 OR6C5P-201ENST00000452388 923 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 SNRPFP4-201ENST00000456366 242 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 AC092757.1-201ENST00000467293 467 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 OR4G11P-201ENST00000492842 939 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.32□□□□□ -1.56
VTA1Q9NP79 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5.32□□□□□ -1.56
VTA1Q9NP79 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.32□□□□□ -1.56
VTA1Q9NP79 AC116347.2-201ENST00000514912 523 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 HSPA8P13-201ENST00000523715 472 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC5.32□□□□□ -1.56
VTA1Q9NP79 AP001781.1-201ENST00000530977 207 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 TOMM20P2-201ENST00000540082 421 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.32□□□□□ -1.56
VTA1Q9NP79 ATP5J2P6-201ENST00000565203 266 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 AC084783.1-201ENST00000565846 910 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.32□□□□□ -1.56
VTA1Q9NP79 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC5.32□□□□□ -1.56
VTA1Q9NP79 AC080078.2-201ENST00000603766 501 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 AL133338.2-201ENST00000604292 736 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.32□□□□□ -1.56
VTA1Q9NP79 AC090116.1-201ENST00000615679 446 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
VTA1Q9NP79 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.32□□□□□ -1.56
VTA1Q9NP79 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
VTA1Q9NP79 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
VTA1Q9NP79 SAMMSON-213ENST00000641336 1521 ntBASIC5.32□□□□□ -1.56
VTA1Q9NP79 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VTA1Q9NP79 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VTA1Q9NP79 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.31□□□□□ -1.56
VTA1Q9NP79 MTND4P5-201ENST00000435821 1374 ntBASIC5.31□□□□□ -1.56
VTA1Q9NP79 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.31□□□□□ -1.56
VTA1Q9NP79 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
VTA1Q9NP79 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.31□□□□□ -1.56
VTA1Q9NP79 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
VTA1Q9NP79 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
VTA1Q9NP79 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VTA1Q9NP79 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VTA1Q9NP79 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VTA1Q9NP79 RNU6-984P-201ENST00000363236 109 ntBASIC5.31□□□□□ -1.56
VTA1Q9NP79 AL590762.2-201ENST00000395798 571 ntBASIC5.31□□□□□ -1.56
VTA1Q9NP79 RNU4-25P-201ENST00000410569 230 ntBASIC5.31□□□□□ -1.56
VTA1Q9NP79 AL031779.1-201ENST00000415663 330 ntBASIC5.31□□□□□ -1.56
VTA1Q9NP79 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.31□□□□□ -1.56
VTA1Q9NP79 RSL24D1P6-201ENST00000426934 401 ntBASIC5.31□□□□□ -1.56
VTA1Q9NP79 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
VTA1Q9NP79 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VTA1Q9NP79 ZYG11AP1-201ENST00000430329 837 ntBASIC5.31□□□□□ -1.56
VTA1Q9NP79 YWHAZP8-201ENST00000436935 731 ntBASIC5.31□□□□□ -1.56
VTA1Q9NP79 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.31□□□□□ -1.56
VTA1Q9NP79 RPS4XP15-201ENST00000489210 795 ntBASIC5.31□□□□□ -1.56
VTA1Q9NP79 AC005726.1-201ENST00000494679 427 ntBASIC5.31□□□□□ -1.56
VTA1Q9NP79 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.31□□□□□ -1.56
VTA1Q9NP79 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.31□□□□□ -1.56
VTA1Q9NP79 CBX3P3-201ENST00000508108 532 ntBASIC5.31□□□□□ -1.56
VTA1Q9NP79 MTCYBP43-201ENST00000513621 740 ntBASIC5.31□□□□□ -1.56
VTA1Q9NP79 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.31□□□□□ -1.56
VTA1Q9NP79 AC105031.1-201ENST00000518550 476 ntBASIC5.31□□□□□ -1.56
VTA1Q9NP79 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VTA1Q9NP79 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.31□□□□□ -1.56
VTA1Q9NP79 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.31□□□□□ -1.56
VTA1Q9NP79 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.31□□□□□ -1.56
VTA1Q9NP79 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.31□□□□□ -1.56
VTA1Q9NP79 AC006362.1-201ENST00000567392 174 ntBASIC5.31□□□□□ -1.56
VTA1Q9NP79 AC233702.9-201ENST00000581528 203 ntBASIC5.31□□□□□ -1.56
VTA1Q9NP79 AC079089.3-201ENST00000603094 673 ntBASIC5.31□□□□□ -1.56
VTA1Q9NP79 BNIP3P11-201ENST00000603878 563 ntBASIC5.31□□□□□ -1.56
VTA1Q9NP79 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.31□□□□□ -1.56
VTA1Q9NP79 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.31□□□□□ -1.56
VTA1Q9NP79 AC080013.4-201ENST00000607624 649 ntBASIC5.31□□□□□ -1.56
VTA1Q9NP79 BX005214.3-202ENST00000619809 325 ntBASIC5.31□□□□□ -1.56
VTA1Q9NP79 U3.53-201ENST00000628922 216 ntBASIC5.31□□□□□ -1.56
VTA1Q9NP79 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.31□□□□□ -1.56
VTA1Q9NP79 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.31□□□□□ -1.56
VTA1Q9NP79 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VTA1Q9NP79 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VTA1Q9NP79 AL022322.2-201ENST00000624072 20397 ntBASIC5.31□□□□□ -1.56
VTA1Q9NP79 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.31□□□□□ -1.56
VTA1Q9NP79 AC135352.1-201ENST00000506173 1418 ntBASIC5.31□□□□□ -1.56
VTA1Q9NP79 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.31□□□□□ -1.56
VTA1Q9NP79 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
VTA1Q9NP79 MTND4P4-201ENST00000439033 1366 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
VTA1Q9NP79 OR14L1P-202ENST00000641545 3009 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VTA1Q9NP79 ERCC6-202ENST00000374127 1782 ntBASIC5.3□□□□□ -1.56
VTA1Q9NP79 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VTA1Q9NP79 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VTA1Q9NP79 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms