Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.34□□□□□ -1.71
POLR1BQ9H9Y6 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.34□□□□□ -1.71
POLR1BQ9H9Y6 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
POLR1BQ9H9Y6 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
POLR1BQ9H9Y6 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
POLR1BQ9H9Y6 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
POLR1BQ9H9Y6 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.34□□□□□ -1.72
POLR1BQ9H9Y6 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
POLR1BQ9H9Y6 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.34□□□□□ -1.72
POLR1BQ9H9Y6 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
POLR1BQ9H9Y6 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
POLR1BQ9H9Y6 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 OR10J6P-201ENST00000289731 930 ntBASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 AL022722.2-201ENST00000402519 180 ntBASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 RNA5SP317-201ENST00000410176 116 ntBASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 RNA5SP311-201ENST00000411290 116 ntBASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 AC069218.2-201ENST00000411665 344 ntBASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 NRBF2P2-201ENST00000413087 861 ntBASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 COX6CP15-201ENST00000426313 211 ntBASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 USP9YP11-201ENST00000427537 717 ntBASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 AL353748.1-201ENST00000440753 474 ntBASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 Z77249.1-201ENST00000444622 1175 ntBASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 NDUFS5P3-201ENST00000450668 321 ntBASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 AC025445.1-201ENST00000502728 300 ntBASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 HMGB3P13-201ENST00000511263 607 ntBASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 RNA5SP446-201ENST00000515955 82 ntBASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 RNA5SP315-201ENST00000516340 116 ntBASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 RNA5SP312-201ENST00000517068 116 ntBASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 RNU6-1261P-201ENST00000517194 104 ntBASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 AC090151.1-201ENST00000520784 730 ntBASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 OR8R1P-201ENST00000543943 764 ntBASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 LSM6P2-201ENST00000552208 177 ntBASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 AC061975.8-201ENST00000587058 721 ntBASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 AC091057.2-201ENST00000602594 792 ntBASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 GAS5-AS1-201ENST00000602767 694 ntBASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 AC245389.1-201ENST00000605141 529 ntBASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 AC097478.2-201ENST00000610572 514 ntBASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 AC011330.2-201ENST00000621680 635 ntBASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 MIR4496-201ENST00000635896 61 ntBASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 MIR6715B-201ENST00000637172 77 ntBASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
POLR1BQ9H9Y6 AL133243.3-201ENST00000617415 3004 ntBASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 AC090229.1-201ENST00000590983 1609 ntBASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 AC109315.1-201ENST00000584143 1347 ntBASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 OR5P1P-201ENST00000299512 925 ntBASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 SNORD74.4-201ENST00000364129 80 ntBASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 RN7SKP280-201ENST00000364196 304 ntBASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 RNU1-13P-201ENST00000384499 162 ntBASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 SSXP10-201ENST00000402595 565 ntBASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 VN1R8P-201ENST00000407739 893 ntBASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 RPL23AP47-201ENST00000408017 460 ntBASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 AL161449.1-201ENST00000414531 1199 ntBASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 KRR1P1-201ENST00000419430 803 ntBASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.32□□□□□ -1.72
POLR1BQ9H9Y6 AL389915.1-201ENST00000422463 466 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms