Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC023194.1-201ENST00000493084 308 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 MTND6P2-201ENST00000512226 524 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 RNU6-513P-201ENST00000516104 104 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 AL589674.2-201ENST00000604304 337 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 AL121655.1-201ENST00000605811 308 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 AL133173.2-201ENST00000614270 90 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 uc_338.9-201ENST00000617424 182 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 MIR6886-201ENST00000619864 61 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 AC073869.8-201ENST00000641806 335 ntBASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SEC61A2Q9H9S3 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 RNU6-451P-201ENST00000362921 107 ntBASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 RN7SKP124-201ENST00000364730 341 ntBASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 MIR323B-201ENST00000385269 82 ntBASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 SNORD115.1-201ENST00000391109 76 ntBASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 AC104297.1-201ENST00000393779 870 ntBASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 RN7SKP266-201ENST00000410232 287 ntBASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 RN7SKP293-201ENST00000411389 296 ntBASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 COX6CP17-201ENST00000421389 185 ntBASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 OR6D1P-201ENST00000436165 939 ntBASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 CBX1P4-201ENST00000439415 457 ntBASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 AC096741.1-201ENST00000472250 846 ntBASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 RPL36AP51-201ENST00000487216 318 ntBASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 COX6B1P2-201ENST00000489624 230 ntBASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 AC114967.1-201ENST00000504890 259 ntBASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 AC108471.1-201ENST00000513977 287 ntBASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 AC027026.1-201ENST00000532323 742 ntBASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 AC007424.1-203ENST00000554613 687 ntBASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 AC009117.1-201ENST00000563948 554 ntBASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 AC037471.2-201ENST00000564941 598 ntBASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 AL360085.1-201ENST00000604713 532 ntBASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 AL118522.2-201ENST00000616045 615 ntBASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 AL691477.1-201ENST00000624398 162 ntBASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 MTCO1P11-201ENST00000429111 1528 ntBASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 AC093849.1-201ENST00000563631 2209 ntBASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SEC61A2Q9H9S3 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 AC025574.1-201ENST00000554784 1653 ntBASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 AC024560.2-201ENST00000507981 1497 ntBASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 AC005261.2-201ENST00000593427 4258 ntBASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.84□□□□□ -1.63
SEC61A2Q9H9S3 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms