Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AL122126.1-201ENST00000546905 1318 ntBASIC3.85□□□□□ -1.79
UBQLN3Q9H347 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.85□□□□□ -1.79
UBQLN3Q9H347 ELL2P4-201ENST00000446870 1376 ntBASIC3.85□□□□□ -1.79
UBQLN3Q9H347 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
UBQLN3Q9H347 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
UBQLN3Q9H347 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
UBQLN3Q9H347 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
UBQLN3Q9H347 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
UBQLN3Q9H347 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
UBQLN3Q9H347 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
UBQLN3Q9H347 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
UBQLN3Q9H347 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.84□□□□□ -1.79
UBQLN3Q9H347 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
UBQLN3Q9H347 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
UBQLN3Q9H347 RNU6-707P-201ENST00000364647 95 ntBASIC3.84□□□□□ -1.79
UBQLN3Q9H347 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.84□□□□□ -1.79
UBQLN3Q9H347 RN7SKP182-201ENST00000410772 298 ntBASIC3.84□□□□□ -1.79
UBQLN3Q9H347 RN7SKP33-201ENST00000410942 340 ntBASIC3.84□□□□□ -1.79
UBQLN3Q9H347 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.84□□□□□ -1.79
UBQLN3Q9H347 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.84□□□□□ -1.79
UBQLN3Q9H347 RPS27AP12-201ENST00000429552 465 ntBASIC3.84□□□□□ -1.79
UBQLN3Q9H347 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.84□□□□□ -1.79
UBQLN3Q9H347 AC092393.1-201ENST00000439625 742 ntBASIC3.84□□□□□ -1.79
UBQLN3Q9H347 AC114755.5-201ENST00000447760 831 ntBASIC3.84□□□□□ -1.79
UBQLN3Q9H347 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.84□□□□□ -1.79
UBQLN3Q9H347 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.84□□□□□ -1.79
UBQLN3Q9H347 RPS20P32-201ENST00000456044 356 ntBASIC3.84□□□□□ -1.79
UBQLN3Q9H347 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
UBQLN3Q9H347 DUXAP8-207ENST00000456786 622 ntBASIC3.84□□□□□ -1.79
UBQLN3Q9H347 AP000873.1-201ENST00000463987 400 ntBASIC3.84□□□□□ -1.79
UBQLN3Q9H347 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
UBQLN3Q9H347 RPL21P131-201ENST00000497298 483 ntBASIC3.84□□□□□ -1.79
UBQLN3Q9H347 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.84□□□□□ -1.79
UBQLN3Q9H347 HIGD1AP3-201ENST00000515857 278 ntBASIC3.84□□□□□ -1.79
UBQLN3Q9H347 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.84□□□□□ -1.79
UBQLN3Q9H347 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.84□□□□□ -1.79
UBQLN3Q9H347 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
UBQLN3Q9H347 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.84□□□□□ -1.79
UBQLN3Q9H347 AC007424.1-203ENST00000554613 687 ntBASIC3.84□□□□□ -1.79
UBQLN3Q9H347 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.84□□□□□ -1.79
UBQLN3Q9H347 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.84□□□□□ -1.79
UBQLN3Q9H347 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.84□□□□□ -1.79
UBQLN3Q9H347 RN7SL339P-201ENST00000580597 296 ntBASIC3.84□□□□□ -1.79
UBQLN3Q9H347 RN7SL600P-201ENST00000581811 299 ntBASIC3.84□□□□□ -1.79
UBQLN3Q9H347 AC245884.10-201ENST00000597355 337 ntBASIC3.84□□□□□ -1.79
UBQLN3Q9H347 AL139286.1-201ENST00000604465 483 ntBASIC3.84□□□□□ -1.79
UBQLN3Q9H347 AL591034.3-201ENST00000605511 685 ntBASIC3.84□□□□□ -1.79
UBQLN3Q9H347 DUXAP10-204ENST00000612052 616 ntBASIC3.84□□□□□ -1.79
UBQLN3Q9H347 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.84□□□□□ -1.79
UBQLN3Q9H347 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.84□□□□□ -1.79
UBQLN3Q9H347 AC010975.3-201ENST00000618727 978 ntBASIC3.84□□□□□ -1.79
UBQLN3Q9H347 AC090772.4-201ENST00000623599 362 ntBASIC3.84□□□□□ -1.79
UBQLN3Q9H347 AC098679.5-201ENST00000624394 571 ntBASIC3.84□□□□□ -1.79
UBQLN3Q9H347 AC068724.3-201ENST00000625906 87 ntBASIC3.84□□□□□ -1.79
UBQLN3Q9H347 OR4G3P-201ENST00000633500 913 ntBASIC3.84□□□□□ -1.79
UBQLN3Q9H347 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.84□□□□□ -1.79
UBQLN3Q9H347 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
UBQLN3Q9H347 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
UBQLN3Q9H347 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.84□□□□□ -1.79
UBQLN3Q9H347 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.8
UBQLN3Q9H347 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
UBQLN3Q9H347 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
UBQLN3Q9H347 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
UBQLN3Q9H347 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
UBQLN3Q9H347 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
UBQLN3Q9H347 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
UBQLN3Q9H347 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
UBQLN3Q9H347 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
UBQLN3Q9H347 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
UBQLN3Q9H347 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
UBQLN3Q9H347 RN7SKP227-201ENST00000364445 330 ntBASIC3.83□□□□□ -1.8
UBQLN3Q9H347 MIR217-201ENST00000384817 110 ntBASIC3.83□□□□□ -1.8
UBQLN3Q9H347 AL022722.2-201ENST00000402519 180 ntBASIC3.83□□□□□ -1.8
UBQLN3Q9H347 MIR1179-201ENST00000408703 91 ntBASIC3.83□□□□□ -1.8
UBQLN3Q9H347 RNA5SP317-201ENST00000410176 116 ntBASIC3.83□□□□□ -1.8
UBQLN3Q9H347 RNA5SP306-201ENST00000411087 107 ntBASIC3.83□□□□□ -1.8
UBQLN3Q9H347 RNA5SP311-201ENST00000411290 116 ntBASIC3.83□□□□□ -1.8
UBQLN3Q9H347 OR4K6P-201ENST00000416478 897 ntBASIC3.83□□□□□ -1.8
UBQLN3Q9H347 AC106883.1-201ENST00000418805 562 ntBASIC3.83□□□□□ -1.8
UBQLN3Q9H347 AL391219.1-201ENST00000422570 483 ntBASIC3.83□□□□□ -1.8
UBQLN3Q9H347 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.83□□□□□ -1.8
UBQLN3Q9H347 AC092017.2-201ENST00000427600 362 ntBASIC3.83□□□□□ -1.8
UBQLN3Q9H347 IFNNP1-201ENST00000429219 553 ntBASIC3.83□□□□□ -1.8
UBQLN3Q9H347 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.83□□□□□ -1.8
UBQLN3Q9H347 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.83□□□□□ -1.8
UBQLN3Q9H347 AL031313.1-201ENST00000448435 256 ntBASIC3.83□□□□□ -1.8
UBQLN3Q9H347 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.83□□□□□ -1.8
UBQLN3Q9H347 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.83□□□□□ -1.8
UBQLN3Q9H347 RAD23BP3-201ENST00000454157 1152 ntBASIC3.83□□□□□ -1.8
UBQLN3Q9H347 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.83□□□□□ -1.8
UBQLN3Q9H347 RPL5P23-201ENST00000496040 868 ntBASIC3.83□□□□□ -1.8
UBQLN3Q9H347 GTF2IP9-201ENST00000502460 301 ntBASIC3.83□□□□□ -1.8
UBQLN3Q9H347 AC146944.2-203ENST00000502493 354 ntBASIC3.83□□□□□ -1.8
UBQLN3Q9H347 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.83□□□□□ -1.8
UBQLN3Q9H347 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.83□□□□□ -1.8
UBQLN3Q9H347 AC139783.2-201ENST00000504847 1145 ntBASIC3.83□□□□□ -1.8
UBQLN3Q9H347 AC139495.1-202ENST00000513164 354 ntBASIC3.83□□□□□ -1.8
UBQLN3Q9H347 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.83□□□□□ -1.8
UBQLN3Q9H347 RNA5SP315-201ENST00000516340 116 ntBASIC3.83□□□□□ -1.8
UBQLN3Q9H347 RNA5SP312-201ENST00000517068 116 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms