Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS11Q9H270 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS11Q9H270 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
VPS11Q9H270 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS11Q9H270 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS11Q9H270 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
VPS11Q9H270 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS11Q9H270 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS11Q9H270 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS11Q9H270 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
VPS11Q9H270 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
VPS11Q9H270 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
VPS11Q9H270 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
VPS11Q9H270 AC025125.1-201ENST00000624743 1922 ntBASIC5.15□□□□□ -1.58
VPS11Q9H270 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
VPS11Q9H270 AC005539.1-201ENST00000443768 1479 ntBASIC5.15□□□□□ -1.58
VPS11Q9H270 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
VPS11Q9H270 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
VPS11Q9H270 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
VPS11Q9H270 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
VPS11Q9H270 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
VPS11Q9H270 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
VPS11Q9H270 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
VPS11Q9H270 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
VPS11Q9H270 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VPS11Q9H270 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS11Q9H270 RNU6-115P-201ENST00000364310 107 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 RNU6-660P-201ENST00000364566 109 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VPS11Q9H270 RNU5A-6P-201ENST00000384136 116 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 Y_RNA.529-201ENST00000384586 119 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 RNU6-1300P-201ENST00000391046 108 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 AL590004.1-201ENST00000405321 300 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 MIR1302-11-201ENST00000408051 138 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 MIR1302-9-201ENST00000408365 138 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 MIR1302-10-201ENST00000408734 138 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS11Q9H270 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.15□□□□□ -1.59
VPS11Q9H270 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS11Q9H270 AC009237.2-201ENST00000421358 284 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS11Q9H270 COX6CP13-201ENST00000428703 226 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS11Q9H270 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS11Q9H270 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 AC104850.1-201ENST00000435940 476 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS11Q9H270 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.15□□□□□ -1.59
VPS11Q9H270 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS11Q9H270 RPL7P36-201ENST00000444633 681 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 MTCO2P25-201ENST00000447065 681 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VPS11Q9H270 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VPS11Q9H270 AL356981.1-201ENST00000454879 684 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 AC091180.1-201ENST00000462104 372 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 AC094085.1-201ENST00000468914 584 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 AC007998.1-201ENST00000474156 672 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 AC079841.1-201ENST00000481228 950 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS11Q9H270 AC025674.1-201ENST00000507074 324 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 RN7SKP46-201ENST00000515942 234 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 RNA5SP373-201ENST00000517271 95 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS11Q9H270 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS11Q9H270 OR7K1P-201ENST00000546439 926 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS11Q9H270 AL157394.1-201ENST00000562983 1224 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS11Q9H270 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS11Q9H270 RPL10P14-201ENST00000565265 298 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 AC093519.1-201ENST00000566109 298 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.15□□□□□ -1.59
VPS11Q9H270 AL390838.2-201ENST00000602394 274 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 FO393422.1-201ENST00000603908 708 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 AL360085.1-201ENST00000604713 532 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 MIR1302-2-201ENST00000607096 138 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS11Q9H270 AL359535.1-201ENST00000612100 1087 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VPS11Q9H270 AC009233.1-201ENST00000616477 371 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 MIR8069-1-201ENST00000616627 86 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
VPS11Q9H270 MIR8069-2-201ENST00000621412 86 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS11Q9H270 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VPS11Q9H270 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS11Q9H270 OR52B5P-202ENST00000641118 1110 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
VPS11Q9H270 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS11Q9H270 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VPS11Q9H270 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
VPS11Q9H270 SAGE2P-201ENST00000420011 2126 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VPS11Q9H270 AC092747.4-201ENST00000620519 1861 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VPS11Q9H270 PABPC1P9-201ENST00000426076 1612 ntBASIC5.15□□□□□ -1.59
VPS11Q9H270 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
VPS11Q9H270 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms