Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.05□□□□□ -1.76
UPF3BQ9BZI7 AC107934.2-201ENST00000518653 310 ntBASIC4.05□□□□□ -1.76
UPF3BQ9BZI7 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.05□□□□□ -1.76
UPF3BQ9BZI7 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.05□□□□□ -1.76
UPF3BQ9BZI7 AC005476.1-201ENST00000554427 397 ntBASIC4.05□□□□□ -1.76
UPF3BQ9BZI7 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.05□□□□□ -1.76
UPF3BQ9BZI7 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
UPF3BQ9BZI7 AC135507.2-201ENST00000612443 309 ntBASIC4.05□□□□□ -1.76
UPF3BQ9BZI7 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.05□□□□□ -1.76
UPF3BQ9BZI7 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.05□□□□□ -1.76
UPF3BQ9BZI7 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
UPF3BQ9BZI7 AC127502.3-201ENST00000636170 1206 ntBASIC4.05□□□□□ -1.76
UPF3BQ9BZI7 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
UPF3BQ9BZI7 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.04□□□□□ -1.76
UPF3BQ9BZI7 AL365440.1-201ENST00000436135 2167 ntBASIC4.04□□□□□ -1.76
UPF3BQ9BZI7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
UPF3BQ9BZI7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
UPF3BQ9BZI7 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
UPF3BQ9BZI7 RNU4-35P-201ENST00000362588 141 ntBASIC4.04□□□□□ -1.76
UPF3BQ9BZI7 MIR128-1-201ENST00000384921 82 ntBASIC4.04□□□□□ -1.76
UPF3BQ9BZI7 SNORD17-201ENST00000390930 237 ntBASIC4.04□□□□□ -1.76
UPF3BQ9BZI7 AC126124.2-201ENST00000413542 321 ntBASIC4.04□□□□□ -1.76
UPF3BQ9BZI7 AC073464.3-201ENST00000422564 712 ntBASIC4.04□□□□□ -1.76
UPF3BQ9BZI7 GLRXP1-201ENST00000423261 334 ntBASIC4.04□□□□□ -1.76
UPF3BQ9BZI7 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.04□□□□□ -1.76
UPF3BQ9BZI7 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.04□□□□□ -1.76
UPF3BQ9BZI7 AC010683.1-201ENST00000473673 378 ntBASIC4.04□□□□□ -1.76
UPF3BQ9BZI7 TRAV31-201ENST00000502780 342 ntBASIC4.04□□□□□ -1.76
UPF3BQ9BZI7 HIGD1AP3-201ENST00000515857 278 ntBASIC4.04□□□□□ -1.76
UPF3BQ9BZI7 RNU6-319P-201ENST00000516025 108 ntBASIC4.04□□□□□ -1.76
UPF3BQ9BZI7 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.04□□□□□ -1.76
UPF3BQ9BZI7 AC103843.2-201ENST00000530523 682 ntBASIC4.04□□□□□ -1.76
UPF3BQ9BZI7 NCAPGP2-201ENST00000557911 754 ntBASIC4.04□□□□□ -1.76
UPF3BQ9BZI7 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.04□□□□□ -1.76
UPF3BQ9BZI7 AC008507.1-201ENST00000587506 734 ntBASIC4.04□□□□□ -1.76
UPF3BQ9BZI7 AC012531.5-201ENST00000611375 151 ntBASIC4.04□□□□□ -1.76
UPF3BQ9BZI7 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.04□□□□□ -1.76
UPF3BQ9BZI7 AL392088.2-201ENST00000637607 285 ntBASIC4.04□□□□□ -1.76
UPF3BQ9BZI7 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
UPF3BQ9BZI7 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.04□□□□□ -1.76
UPF3BQ9BZI7 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
UPF3BQ9BZI7 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.03□□□□□ -1.76
UPF3BQ9BZI7 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.03□□□□□ -1.76
UPF3BQ9BZI7 AC058791.1-201ENST00000608412 3198 ntBASIC4.03□□□□□ -1.76
UPF3BQ9BZI7 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
UPF3BQ9BZI7 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.03□□□□□ -1.76
UPF3BQ9BZI7 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
UPF3BQ9BZI7 U3.19-201ENST00000390893 196 ntBASIC4.03□□□□□ -1.76
UPF3BQ9BZI7 AL122016.1-201ENST00000403365 367 ntBASIC4.03□□□□□ -1.76
UPF3BQ9BZI7 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
UPF3BQ9BZI7 RPL21P110-201ENST00000433345 446 ntBASIC4.03□□□□□ -1.76
UPF3BQ9BZI7 AC008264.1-201ENST00000447612 367 ntBASIC4.03□□□□□ -1.76
UPF3BQ9BZI7 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.03□□□□□ -1.76
UPF3BQ9BZI7 HMGB3P8-201ENST00000449709 577 ntBASIC4.03□□□□□ -1.76
UPF3BQ9BZI7 AC069306.1-201ENST00000507006 843 ntBASIC4.03□□□□□ -1.76
UPF3BQ9BZI7 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.03□□□□□ -1.76
UPF3BQ9BZI7 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.03□□□□□ -1.76
UPF3BQ9BZI7 AP005205.1-201ENST00000563503 508 ntBASIC4.03□□□□□ -1.76
UPF3BQ9BZI7 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.03□□□□□ -1.76
UPF3BQ9BZI7 MIR5047-201ENST00000579212 100 ntBASIC4.03□□□□□ -1.76
UPF3BQ9BZI7 AC084373.1-201ENST00000603311 235 ntBASIC4.03□□□□□ -1.76
UPF3BQ9BZI7 AL096803.3-201ENST00000609032 532 ntBASIC4.03□□□□□ -1.76
UPF3BQ9BZI7 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.03□□□□□ -1.76
UPF3BQ9BZI7 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.03□□□□□ -1.76
UPF3BQ9BZI7 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
UPF3BQ9BZI7 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
UPF3BQ9BZI7 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.03□□□□□ -1.76
UPF3BQ9BZI7 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.03□□□□□ -1.76
UPF3BQ9BZI7 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
UPF3BQ9BZI7 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
UPF3BQ9BZI7 MFSD8-233ENST00000641482 4860 ntBASIC4.03□□□□□ -1.77
UPF3BQ9BZI7 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
UPF3BQ9BZI7 RIOK3P1-201ENST00000418778 1528 ntBASIC4.02□□□□□ -1.77
UPF3BQ9BZI7 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
UPF3BQ9BZI7 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
UPF3BQ9BZI7 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.02□□□□□ -1.77
UPF3BQ9BZI7 MIR92A2-201ENST00000385299 75 ntBASIC4.02□□□□□ -1.77
UPF3BQ9BZI7 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
UPF3BQ9BZI7 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
UPF3BQ9BZI7 RPL31P52-201ENST00000407532 367 ntBASIC4.02□□□□□ -1.77
UPF3BQ9BZI7 RNA5SP120-201ENST00000410900 112 ntBASIC4.02□□□□□ -1.77
UPF3BQ9BZI7 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.02□□□□□ -1.77
UPF3BQ9BZI7 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.02□□□□□ -1.77
UPF3BQ9BZI7 MTCYBP7-201ENST00000419540 1134 ntBASIC4.02□□□□□ -1.77
UPF3BQ9BZI7 AC048351.1-201ENST00000420064 602 ntBASIC4.02□□□□□ -1.77
UPF3BQ9BZI7 AC073063.1-201ENST00000434352 607 ntBASIC4.02□□□□□ -1.77
UPF3BQ9BZI7 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.02□□□□□ -1.77
UPF3BQ9BZI7 AC006994.1-201ENST00000438212 839 ntBASIC4.02□□□□□ -1.77
UPF3BQ9BZI7 HMGN2P7-201ENST00000456186 273 ntBASIC4.02□□□□□ -1.77
UPF3BQ9BZI7 MTCYBP14-201ENST00000457471 715 ntBASIC4.02□□□□□ -1.77
UPF3BQ9BZI7 RPL23AP62-201ENST00000463396 453 ntBASIC4.02□□□□□ -1.77
UPF3BQ9BZI7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.02□□□□□ -1.77
UPF3BQ9BZI7 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.02□□□□□ -1.77
UPF3BQ9BZI7 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.02□□□□□ -1.77
UPF3BQ9BZI7 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.02□□□□□ -1.77
UPF3BQ9BZI7 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.02□□□□□ -1.77
UPF3BQ9BZI7 AC110801.1-201ENST00000623590 212 ntBASIC4.02□□□□□ -1.77
UPF3BQ9BZI7 CFTRP2-201ENST00000634304 199 ntBASIC4.02□□□□□ -1.77
UPF3BQ9BZI7 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
UPF3BQ9BZI7 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms