Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 AC124293.1-201ENST00000530034 493 ntBASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 AC008011.1-201ENST00000545989 227 ntBASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 MTCO2P2-201ENST00000591258 225 ntBASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 BNIP3P38-201ENST00000601117 544 ntBASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 AC112220.2-201ENST00000605513 533 ntBASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 AC024060.1-201ENST00000607052 494 ntBASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 AC116651.1-201ENST00000609724 556 ntBASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 AC063944.3-201ENST00000609969 533 ntBASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 U6.48-201ENST00000618523 106 ntBASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 WDR75-207ENST00000631047 270 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 AC025125.1-201ENST00000624743 1922 ntBASIC3.74□□□□□ -1.81
CCDC28BQ9BUN5 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 AP002001.2-201ENST00000529025 1469 ntBASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 MIR383-201ENST00000362257 73 ntBASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 RNU6-805P-201ENST00000365643 106 ntBASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 AC016397.1-201ENST00000412463 242 ntBASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 AC017079.2-201ENST00000416102 485 ntBASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 MTND4P3-201ENST00000417829 541 ntBASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 RPL17P36-201ENST00000420302 549 ntBASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 RPS27AP7-201ENST00000422792 455 ntBASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 HIGD1AP12-201ENST00000427832 281 ntBASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 AC092634.2-201ENST00000428146 1010 ntBASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 MOB1AP1-201ENST00000430903 535 ntBASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 CBX1P4-201ENST00000439415 457 ntBASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 AL138878.2-201ENST00000440581 1241 ntBASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 RN7SL303P-201ENST00000469773 251 ntBASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 AL161747.1-201ENST00000480068 358 ntBASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 AC010285.3-201ENST00000511668 676 ntBASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 Vault.1-201ENST00000516474 102 ntBASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 AC034205.1-201ENST00000520621 638 ntBASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 AC008489.1-201ENST00000524271 483 ntBASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 AL160237.3-201ENST00000604114 1013 ntBASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 AC019193.2-201ENST00000610012 634 ntBASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 MIR8059-201ENST00000620427 81 ntBASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 MIR6719-201ENST00000622428 87 ntBASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 MIR3653-201ENST00000625572 110 ntBASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC28BQ9BUN5 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 RNA5SP505-201ENST00000364748 108 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 RNU6-283P-201ENST00000364788 107 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 MIR525-201ENST00000384978 85 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 RNA5SP293-201ENST00000410527 113 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 RN7SKP33-201ENST00000410942 340 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 RPS3AP25-201ENST00000411660 793 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 RPS7P9-201ENST00000414704 586 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 AC108032.1-201ENST00000416706 207 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 AL009048.1-201ENST00000450437 298 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 MRPS31P2-201ENST00000451581 518 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 OR2AF1P-201ENST00000454899 889 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 CFTRP1-201ENST00000456646 183 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 RPL21P11-201ENST00000461458 483 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 RPS27P29-201ENST00000463110 252 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 AC010401.1-201ENST00000463867 348 ntBASIC3.72□□□□□ -1.81
CCDC28BQ9BUN5 RPL21P131-201ENST00000497298 483 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms