Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 CKS1BP3-201ENST00000600888 237 ntBASIC6.08□□□□□ -1.44
SYNGAP1Q96PV0 AP000769.2-201ENST00000602344 396 ntBASIC6.08□□□□□ -1.44
SYNGAP1Q96PV0 AL391646.1-201ENST00000603860 190 ntBASIC6.08□□□□□ -1.44
SYNGAP1Q96PV0 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC6.08□□□□□ -1.44
SYNGAP1Q96PV0 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC6.08□□□□□ -1.44
SYNGAP1Q96PV0 AL356274.1-201ENST00000617064 410 ntBASIC6.08□□□□□ -1.44
SYNGAP1Q96PV0 AC068831.8-201ENST00000620171 435 ntBASIC6.08□□□□□ -1.44
SYNGAP1Q96PV0 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC6.08□□□□□ -1.44
SYNGAP1Q96PV0 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.08□□□□□ -1.44
SYNGAP1Q96PV0 AC026634.1-201ENST00000634369 198 ntBASIC6.08□□□□□ -1.44
SYNGAP1Q96PV0 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SYNGAP1Q96PV0 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SYNGAP1Q96PV0 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.08□□□□□ -1.44
SYNGAP1Q96PV0 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
SYNGAP1Q96PV0 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
SYNGAP1Q96PV0 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.08□□□□□ -1.44
SYNGAP1Q96PV0 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNGAP1Q96PV0 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNGAP1Q96PV0 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SYNGAP1Q96PV0 AL078621.3-201ENST00000623707 2042 ntBASIC6.08□□□□□ -1.44
SYNGAP1Q96PV0 AC104964.3-201ENST00000606115 2860 ntBASIC6.08□□□□□ -1.44
SYNGAP1Q96PV0 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.08□□□□□ -1.44
SYNGAP1Q96PV0 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6.08□□□□□ -1.44
SYNGAP1Q96PV0 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SYNGAP1Q96PV0 AC091046.3-201ENST00000631455 1574 ntBASIC6.08□□□□□ -1.44
SYNGAP1Q96PV0 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 SYF2-202ENST00000354361 926 ntTSL 2 BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 RNU6-845P-201ENST00000362578 103 ntBASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 RNU6-777P-201ENST00000364265 104 ntBASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 AC068538.1-201ENST00000376856 336 ntBASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 AL590290.1-201ENST00000405336 380 ntBASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 TAAR7P-201ENST00000436141 242 ntBASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 SNRPEP7-201ENST00000438350 220 ntBASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 RPL23AP20-201ENST00000447965 421 ntBASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 AL121877.1-201ENST00000453704 622 ntBASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 MTND1P12-201ENST00000455231 147 ntBASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 AC009127.1-201ENST00000467090 155 ntBASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 IGHVIII-2-1-201ENST00000518843 291 ntBASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 HIGD1AP6-201ENST00000521833 279 ntBASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 AC007687.1-201ENST00000602704 304 ntBASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 AC007621.1-201ENST00000604544 437 ntBASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 AL360085.1-201ENST00000604713 532 ntBASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 AC068722.2-201ENST00000618734 544 ntBASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 AC093311.1-201ENST00000506586 2021 ntBASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 ICE2P1-201ENST00000512800 1849 ntBASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SYNGAP1Q96PV0 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 SNRPEP3-201ENST00000338402 276 ntBASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 RNA5SP388-201ENST00000362584 119 ntBASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 Y_RNA.381-201ENST00000365666 102 ntBASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 Y_RNA.394-201ENST00000383942 103 ntBASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 RNU2-28P-201ENST00000410457 189 ntBASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 AL590139.1-201ENST00000416267 400 ntBASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 SDCBPP2-201ENST00000424643 885 ntBASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 AL158073.1-201ENST00000426848 1104 ntBASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SYNGAP1Q96PV0 AL360081.1-201ENST00000428299 555 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms