Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 MIR585-201ENST00000384887 94 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 AL590762.2-201ENST00000395798 571 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 HMGB1P17-201ENST00000403495 628 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 FCF1P9-201ENST00000412546 282 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 RPL7P57-201ENST00000423238 740 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 AC234779.1-201ENST00000425910 285 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 AL360081.1-201ENST00000428299 555 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 NRBF2P3-201ENST00000432731 865 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 AL049745.1-201ENST00000433953 286 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 AC006466.1-201ENST00000438721 289 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 ARPC3P5-201ENST00000448802 534 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 PAXBP1P1-201ENST00000449315 447 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 PDSS1P2-201ENST00000449397 678 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 AC010733.1-201ENST00000451515 401 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 AC091685.2-201ENST00000454924 864 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 AC017015.1-201ENST00000477387 286 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 RPS23P1-201ENST00000491662 432 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 BNIP3P41-201ENST00000503774 571 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 POU5F1P7-201ENST00000508759 541 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 AC093809.1-201ENST00000509155 340 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 AC109464.2-201ENST00000510242 943 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 AC133555.2-201ENST00000550213 292 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 CR383656.6-201ENST00000550518 394 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 HSPE1P3-201ENST00000559254 309 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 AC087477.6-201ENST00000559595 843 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 RN7SL435P-201ENST00000584418 282 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 AC110743.1-201ENST00000584870 478 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 BNIP3P23-201ENST00000599655 511 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 AC103710.4-201ENST00000609301 899 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 AC092794.1-201ENST00000612734 582 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 AC093591.3-201ENST00000634516 308 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 AC068137.3-201ENST00000639191 341 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 AC073869.6-201ENST00000640656 341 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 AP001642.1-201ENST00000624727 2117 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 DCAF13P1-201ENST00000495256 1330 ntBASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CTHRC1Q96CG8 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 MUC2-202ENST00000613187 4845 ntBASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 RNA5SP391-201ENST00000363456 119 ntBASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 RN7SKP103-201ENST00000363848 320 ntBASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 AC136624.1-201ENST00000400791 413 ntBASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 RPL31P52-201ENST00000407532 367 ntBASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 RSU1P3-201ENST00000412878 835 ntBASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 RPL7P30-201ENST00000420888 709 ntBASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 RPS26P47-201ENST00000427219 348 ntBASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 USP9YP9-201ENST00000429406 715 ntBASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 RPL36P19-201ENST00000430744 301 ntBASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 RPL7P31-201ENST00000450192 724 ntBASIC4.44□□□□□ -1.7
CTHRC1Q96CG8 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms