Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 WISP1-OT1-201ENST00000602893 642 ntBASIC5.1□□□□□ -1.59
HPS3Q969F9 BNIP3P11-201ENST00000603878 563 ntBASIC5.1□□□□□ -1.59
HPS3Q969F9 AC024560.3-201ENST00000608482 349 ntBASIC5.1□□□□□ -1.59
HPS3Q969F9 AC078899.5-201ENST00000612475 178 ntBASIC5.1□□□□□ -1.59
HPS3Q969F9 AC092140.2-201ENST00000618027 521 ntBASIC5.1□□□□□ -1.59
HPS3Q969F9 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
HPS3Q969F9 MIR7703-201ENST00000620784 77 ntBASIC5.1□□□□□ -1.59
HPS3Q969F9 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.1□□□□□ -1.59
HPS3Q969F9 U3.53-201ENST00000628922 216 ntBASIC5.1□□□□□ -1.59
HPS3Q969F9 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
HPS3Q969F9 AC012618.3-205ENST00000637896 1496 ntBASIC5.1□□□□□ -1.59
HPS3Q969F9 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.1□□□□□ -1.59
HPS3Q969F9 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.1□□□□□ -1.59
HPS3Q969F9 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
HPS3Q969F9 SAGE2P-201ENST00000420011 2126 ntBASIC5.09□□□□□ -1.59
HPS3Q969F9 SDAD1P1-202ENST00000524156 2051 ntBASIC5.09□□□□□ -1.59
HPS3Q969F9 AC011978.2-201ENST00000569835 2054 ntBASIC5.09□□□□□ -1.59
HPS3Q969F9 ZFRP1-201ENST00000457579 2970 ntBASIC5.09□□□□□ -1.59
HPS3Q969F9 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HPS3Q969F9 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HPS3Q969F9 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
HPS3Q969F9 RNU6-1243P-201ENST00000364028 107 ntBASIC5.09□□□□□ -1.59
HPS3Q969F9 RNA5SP88-201ENST00000365560 109 ntBASIC5.09□□□□□ -1.59
HPS3Q969F9 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HPS3Q969F9 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HPS3Q969F9 AC016397.1-201ENST00000412463 242 ntBASIC5.09□□□□□ -1.59
HPS3Q969F9 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.09□□□□□ -1.59
HPS3Q969F9 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.09□□□□□ -1.59
HPS3Q969F9 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.09□□□□□ -1.59
HPS3Q969F9 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.09□□□□□ -1.59
HPS3Q969F9 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.09□□□□□ -1.59
HPS3Q969F9 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.09□□□□□ -1.59
HPS3Q969F9 SCARNA10-201ENST00000459255 330 ntBASIC5.09□□□□□ -1.59
HPS3Q969F9 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.09□□□□□ -1.59
HPS3Q969F9 AC097493.1-201ENST00000463958 372 ntBASIC5.09□□□□□ -1.59
HPS3Q969F9 AC104763.1-201ENST00000475274 360 ntBASIC5.09□□□□□ -1.59
HPS3Q969F9 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.09□□□□□ -1.59
HPS3Q969F9 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.09□□□□□ -1.59
HPS3Q969F9 MTCYBP43-201ENST00000513621 740 ntBASIC5.09□□□□□ -1.59
HPS3Q969F9 RNA5SP446-201ENST00000515955 82 ntBASIC5.09□□□□□ -1.59
HPS3Q969F9 CYCSP2-201ENST00000558168 301 ntBASIC5.09□□□□□ -1.59
HPS3Q969F9 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.09□□□□□ -1.59
HPS3Q969F9 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.09□□□□□ -1.59
HPS3Q969F9 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.09□□□□□ -1.59
HPS3Q969F9 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.09□□□□□ -1.59
HPS3Q969F9 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.09□□□□□ -1.59
HPS3Q969F9 AC090948.2-201ENST00000607363 564 ntBASIC5.09□□□□□ -1.59
HPS3Q969F9 AL159169.3-201ENST00000608871 561 ntBASIC5.09□□□□□ -1.59
HPS3Q969F9 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.09□□□□□ -1.59
HPS3Q969F9 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HPS3Q969F9 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.09□□□□□ -1.59
HPS3Q969F9 AL133243.3-201ENST00000617415 3004 ntBASIC5.09□□□□□ -1.6
HPS3Q969F9 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.08□□□□□ -1.6
HPS3Q969F9 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
HPS3Q969F9 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
HPS3Q969F9 ZNF833P-201ENST00000424938 1494 ntBASIC5.08□□□□□ -1.6
HPS3Q969F9 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HPS3Q969F9 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.08□□□□□ -1.6
HPS3Q969F9 ELL2P4-201ENST00000446870 1376 ntBASIC5.08□□□□□ -1.6
HPS3Q969F9 AC108751.5-201ENST00000492880 1336 ntBASIC5.08□□□□□ -1.6
HPS3Q969F9 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.08□□□□□ -1.6
HPS3Q969F9 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.08□□□□□ -1.6
HPS3Q969F9 OR52B1P-201ENST00000316506 909 ntBASIC5.08□□□□□ -1.6
HPS3Q969F9 Y_RNA.201-201ENST00000364052 96 ntBASIC5.08□□□□□ -1.6
HPS3Q969F9 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HPS3Q969F9 MT-TH-201ENST00000387441 69 ntBASIC5.08□□□□□ -1.6
HPS3Q969F9 RN7SKP267-201ENST00000410381 285 ntBASIC5.08□□□□□ -1.6
HPS3Q969F9 RAB28P1-201ENST00000411517 641 ntBASIC5.08□□□□□ -1.6
HPS3Q969F9 AC083875.1-201ENST00000419509 405 ntBASIC5.08□□□□□ -1.6
HPS3Q969F9 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.08□□□□□ -1.6
HPS3Q969F9 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.08□□□□□ -1.6
HPS3Q969F9 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.08□□□□□ -1.6
HPS3Q969F9 USP9YP9-201ENST00000429406 715 ntBASIC5.08□□□□□ -1.6
HPS3Q969F9 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.08□□□□□ -1.6
HPS3Q969F9 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.08□□□□□ -1.6
HPS3Q969F9 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.08□□□□□ -1.6
HPS3Q969F9 UBE2FP3-201ENST00000436366 524 ntBASIC5.08□□□□□ -1.6
HPS3Q969F9 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.08□□□□□ -1.6
HPS3Q969F9 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.08□□□□□ -1.6
HPS3Q969F9 OR6C5P-201ENST00000452388 923 ntBASIC5.08□□□□□ -1.6
HPS3Q969F9 TRGVB-201ENST00000453257 471 ntBASIC5.08□□□□□ -1.6
HPS3Q969F9 ISCUP1-201ENST00000454451 448 ntBASIC5.08□□□□□ -1.6
HPS3Q969F9 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.08□□□□□ -1.6
HPS3Q969F9 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HPS3Q969F9 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC5.08□□□□□ -1.6
HPS3Q969F9 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.08□□□□□ -1.6
HPS3Q969F9 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
HPS3Q969F9 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.08□□□□□ -1.6
HPS3Q969F9 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.08□□□□□ -1.6
HPS3Q969F9 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.08□□□□□ -1.6
HPS3Q969F9 HMGB1P19-201ENST00000517578 577 ntBASIC5.08□□□□□ -1.6
HPS3Q969F9 AC008802.1-201ENST00000519121 791 ntBASIC5.08□□□□□ -1.6
HPS3Q969F9 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.08□□□□□ -1.6
HPS3Q969F9 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.08□□□□□ -1.6
HPS3Q969F9 MIR4637-201ENST00000582405 84 ntBASIC5.08□□□□□ -1.6
HPS3Q969F9 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.08□□□□□ -1.6
HPS3Q969F9 MTCYBP22-201ENST00000603788 447 ntBASIC5.08□□□□□ -1.6
HPS3Q969F9 AC092653.1-201ENST00000608509 531 ntBASIC5.08□□□□□ -1.6
HPS3Q969F9 LINC00901.1-201ENST00000617252 152 ntBASIC5.08□□□□□ -1.6
HPS3Q969F9 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms