Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 WBP1LP4-201ENST00000505043 344 ntBASIC4.7□□□□□ -1.66
ATP2A3Q93084 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.7□□□□□ -1.66
ATP2A3Q93084 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.7□□□□□ -1.66
ATP2A3Q93084 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.7□□□□□ -1.66
ATP2A3Q93084 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.7□□□□□ -1.66
ATP2A3Q93084 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.7□□□□□ -1.66
ATP2A3Q93084 AF279873.1-201ENST00000523393 313 ntBASIC4.7□□□□□ -1.66
ATP2A3Q93084 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.7□□□□□ -1.66
ATP2A3Q93084 ELOCP32-201ENST00000548625 324 ntBASIC4.7□□□□□ -1.66
ATP2A3Q93084 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.7□□□□□ -1.66
ATP2A3Q93084 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.7□□□□□ -1.66
ATP2A3Q93084 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.7□□□□□ -1.66
ATP2A3Q93084 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.7□□□□□ -1.66
ATP2A3Q93084 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.7□□□□□ -1.66
ATP2A3Q93084 MTCYBP33-201ENST00000575007 1130 ntBASIC4.7□□□□□ -1.66
ATP2A3Q93084 AC008687.2-201ENST00000597865 520 ntBASIC4.7□□□□□ -1.66
ATP2A3Q93084 AL390838.2-201ENST00000602394 274 ntBASIC4.7□□□□□ -1.66
ATP2A3Q93084 AC010680.4-201ENST00000605334 543 ntBASIC4.7□□□□□ -1.66
ATP2A3Q93084 AL158042.1-201ENST00000605338 460 ntBASIC4.7□□□□□ -1.66
ATP2A3Q93084 AC023158.2-201ENST00000614876 543 ntBASIC4.7□□□□□ -1.66
ATP2A3Q93084 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.7□□□□□ -1.66
ATP2A3Q93084 AC103706.2-201ENST00000638080 240 ntBASIC4.7□□□□□ -1.66
ATP2A3Q93084 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATP2A3Q93084 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATP2A3Q93084 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATP2A3Q93084 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATP2A3Q93084 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
ATP2A3Q93084 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.7□□□□□ -1.66
ATP2A3Q93084 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.7□□□□□ -1.66
ATP2A3Q93084 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
ATP2A3Q93084 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
ATP2A3Q93084 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATP2A3Q93084 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATP2A3Q93084 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
ATP2A3Q93084 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ATP2A3Q93084 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
ATP2A3Q93084 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ATP2A3Q93084 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ATP2A3Q93084 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ATP2A3Q93084 ERCC6-202ENST00000374127 1782 ntBASIC4.69□□□□□ -1.66
ATP2A3Q93084 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
ATP2A3Q93084 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
ATP2A3Q93084 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
ATP2A3Q93084 AL450992.3-201ENST00000413192 568 ntBASIC4.69□□□□□ -1.66
ATP2A3Q93084 RPS15AP40-201ENST00000419621 391 ntBASIC4.69□□□□□ -1.66
ATP2A3Q93084 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.69□□□□□ -1.66
ATP2A3Q93084 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.69□□□□□ -1.66
ATP2A3Q93084 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.69□□□□□ -1.66
ATP2A3Q93084 MTND1P34-201ENST00000438556 671 ntBASIC4.69□□□□□ -1.66
ATP2A3Q93084 AC093155.1-201ENST00000440164 826 ntBASIC4.69□□□□□ -1.66
ATP2A3Q93084 MTND5P2-201ENST00000442927 1142 ntBASIC4.69□□□□□ -1.66
ATP2A3Q93084 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.69□□□□□ -1.66
ATP2A3Q93084 NDUFS5P3-201ENST00000450668 321 ntBASIC4.69□□□□□ -1.66
ATP2A3Q93084 RFC5P1-201ENST00000454419 874 ntBASIC4.69□□□□□ -1.66
ATP2A3Q93084 ISCUP1-201ENST00000454451 448 ntBASIC4.69□□□□□ -1.66
ATP2A3Q93084 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.69□□□□□ -1.66
ATP2A3Q93084 RPL5P24-201ENST00000463742 885 ntBASIC4.69□□□□□ -1.66
ATP2A3Q93084 GAPDHP36-201ENST00000480688 918 ntBASIC4.69□□□□□ -1.66
ATP2A3Q93084 RPS27P23-201ENST00000487608 251 ntBASIC4.69□□□□□ -1.66
ATP2A3Q93084 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ATP2A3Q93084 MTCYBP16-201ENST00000509187 1129 ntBASIC4.69□□□□□ -1.66
ATP2A3Q93084 AC048346.1-201ENST00000510247 144 ntBASIC4.69□□□□□ -1.66
ATP2A3Q93084 AC109445.1-201ENST00000512356 383 ntBASIC4.69□□□□□ -1.66
ATP2A3Q93084 Y_RNA.655-201ENST00000515919 96 ntBASIC4.69□□□□□ -1.66
ATP2A3Q93084 RNA5SP360-201ENST00000516555 118 ntBASIC4.69□□□□□ -1.66
ATP2A3Q93084 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.69□□□□□ -1.66
ATP2A3Q93084 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.69□□□□□ -1.66
ATP2A3Q93084 AC005832.3-201ENST00000537929 631 ntBASIC4.69□□□□□ -1.66
ATP2A3Q93084 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.69□□□□□ -1.66
ATP2A3Q93084 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.69□□□□□ -1.66
ATP2A3Q93084 AP001180.3-201ENST00000582221 145 ntBASIC4.69□□□□□ -1.66
ATP2A3Q93084 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.69□□□□□ -1.66
ATP2A3Q93084 VN1R82P-201ENST00000601481 356 ntBASIC4.69□□□□□ -1.66
ATP2A3Q93084 AC103792.1-201ENST00000603591 919 ntBASIC4.69□□□□□ -1.66
ATP2A3Q93084 AC009220.3-201ENST00000604318 586 ntBASIC4.69□□□□□ -1.66
ATP2A3Q93084 AL390816.3-201ENST00000604527 1066 ntBASIC4.69□□□□□ -1.66
ATP2A3Q93084 AC121247.2-201ENST00000604776 136 ntBASIC4.69□□□□□ -1.66
ATP2A3Q93084 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ATP2A3Q93084 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
ATP2A3Q93084 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.69□□□□□ -1.66
ATP2A3Q93084 AP000776.1-201ENST00000530032 1663 ntBASIC4.69□□□□□ -1.66
ATP2A3Q93084 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ATP2A3Q93084 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ATP2A3Q93084 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.69□□□□□ -1.66
ATP2A3Q93084 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.69□□□□□ -1.66
ATP2A3Q93084 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ATP2A3Q93084 AC005539.1-201ENST00000443768 1479 ntBASIC4.69□□□□□ -1.66
ATP2A3Q93084 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
ATP2A3Q93084 AL391684.1-202ENST00000641293 1636 ntBASIC4.68□□□□□ -1.66
ATP2A3Q93084 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.68□□□□□ -1.66
ATP2A3Q93084 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.68□□□□□ -1.66
ATP2A3Q93084 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
ATP2A3Q93084 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ATP2A3Q93084 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ATP2A3Q93084 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
ATP2A3Q93084 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ATP2A3Q93084 RNU6-839P-201ENST00000363347 108 ntBASIC4.68□□□□□ -1.66
ATP2A3Q93084 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ATP2A3Q93084 HSPD1P16-201ENST00000402302 394 ntBASIC4.68□□□□□ -1.66
ATP2A3Q93084 AL078595.1-201ENST00000404458 226 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms