Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 ZNF33CP-201ENST00000432492 2030 ntBASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 CASC19-228ENST00000641414 1684 ntBASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 ZNF519P1-201ENST00000449011 1626 ntBASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 AC010624.4-201ENST00000597606 1351 ntBASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 LCN1P2-201ENST00000372030 223 ntBASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 RNU6-1040P-201ENST00000383974 107 ntBASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 RNU6-339P-201ENST00000384310 107 ntBASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 RNU6-907P-201ENST00000390924 102 ntBASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 MIR548F4-201ENST00000408515 105 ntBASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 RNU6-985P-201ENST00000410182 104 ntBASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 Y_RNA.605-201ENST00000410577 105 ntBASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 FAM183DP-201ENST00000421987 399 ntBASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 AC007365.2-201ENST00000428806 458 ntBASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 AL022324.2-201ENST00000434827 780 ntBASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 GAPDHP37-201ENST00000442317 968 ntBASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 AC010655.1-201ENST00000449336 292 ntBASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 BTF3P15-201ENST00000455606 336 ntBASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 SCARNA18-201ENST00000459004 134 ntBASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 AC116533.1-201ENST00000459748 321 ntBASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 RPL23AP55-201ENST00000498163 452 ntBASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 AC093815.1-201ENST00000508637 280 ntBASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 MTCO2P24-201ENST00000515611 426 ntBASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 RN7SKP82-201ENST00000516786 223 ntBASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 MIR3149-201ENST00000584629 83 ntBASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 AL138960.1-201ENST00000613838 513 ntBASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 AL138726.1-201ENST00000614873 333 ntBASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 RN7SL126P-201ENST00000616400 299 ntBASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 AC022418.1-201ENST00000624118 445 ntBASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 AP000550.3-201ENST00000637734 379 ntBASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
DEPDC4Q8N2C3 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 AL672167.1-205ENST00000641112 3080 ntBASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 AC108751.5-201ENST00000492880 1336 ntBASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 RNU6-1115P-201ENST00000362490 106 ntBASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 RNU6-574P-201ENST00000384265 107 ntBASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 RNU6-1127P-201ENST00000384580 107 ntBASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 RNU6-328P-201ENST00000390887 106 ntBASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 AL023284.3-201ENST00000407767 334 ntBASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 RPS12P24-201ENST00000412619 387 ntBASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 RPL30P2-201ENST00000414021 291 ntBASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 AC018865.2-201ENST00000423631 129 ntBASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 RAC1P6-201ENST00000423911 575 ntBASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 RPL3P11-201ENST00000434028 1146 ntBASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 AC019185.1-201ENST00000442718 389 ntBASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 RPS15AP27-201ENST00000449183 343 ntBASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 TVP23CP1-201ENST00000450317 639 ntBASIC6.1□□□□□ -1.43
DEPDC4Q8N2C3 AC005517.1-201ENST00000452091 489 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms