Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRT78Q8N1N4 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 AC073429.2-201ENST00000569694 1444 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 AC000374.1-201ENST00000434698 1745 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 RNU6-289P-201ENST00000364093 107 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 MTND4LP20-201ENST00000402379 270 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 AL355379.1-201ENST00000405542 640 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 AL627308.1-201ENST00000435693 821 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 PRPF38AP2-201ENST00000438179 851 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 AL590399.6-201ENST00000446396 307 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 MTCO2P7-201ENST00000446518 666 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 BTF3P6-201ENST00000448054 499 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 RPS20P24-201ENST00000457473 361 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 BX284632.1-201ENST00000478218 541 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 RPS4XP14-201ENST00000493072 781 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 AC008953.1-201ENST00000497334 318 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 AC107401.1-201ENST00000503426 685 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 AC112198.1-201ENST00000505369 1220 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 AC093809.1-201ENST00000509155 340 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 RN7SKP116-201ENST00000516902 319 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 OR4R3P-201ENST00000525084 838 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 AC068587.4-201ENST00000533893 186 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 OR6C7P-201ENST00000547875 934 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 AC084824.1-201ENST00000550917 1005 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 SNORA74C-1-201ENST00000580726 201 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 HMGB2P1-201ENST00000591146 634 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 MEMO1P5-201ENST00000604810 406 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 AC092354.1-201ENST00000606057 376 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 AC135507.1-201ENST00000607214 561 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 AC015914.2-201ENST00000618167 288 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 Z69908.1-201ENST00000622603 247 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 AC012414.7-202ENST00000622705 1090 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 AC004009.2-201ENST00000623016 728 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 MTND4P16-201ENST00000466108 1367 ntBASIC4.73□□□□□ -1.65
KRT78Q8N1N4 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.73□□□□□ -1.65
KRT78Q8N1N4 AC139713.2-215ENST00000641428 5037 ntBASIC4.72□□□□□ -1.65
KRT78Q8N1N4 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.72□□□□□ -1.65
KRT78Q8N1N4 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
KRT78Q8N1N4 KARSP3-201ENST00000571212 1504 ntBASIC4.72□□□□□ -1.65
KRT78Q8N1N4 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRT78Q8N1N4 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
KRT78Q8N1N4 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
KRT78Q8N1N4 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
KRT78Q8N1N4 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
KRT78Q8N1N4 RNU6-28P-201ENST00000362378 107 ntBASIC4.72□□□□□ -1.65
KRT78Q8N1N4 RNU6-433P-201ENST00000363216 104 ntBASIC4.72□□□□□ -1.65
KRT78Q8N1N4 Y_RNA.493-201ENST00000384422 102 ntBASIC4.72□□□□□ -1.65
KRT78Q8N1N4 RNU6-952P-201ENST00000391164 108 ntBASIC4.72□□□□□ -1.65
KRT78Q8N1N4 SNORA26.8-201ENST00000391306 124 ntBASIC4.72□□□□□ -1.65
KRT78Q8N1N4 AC136624.1-201ENST00000400791 413 ntBASIC4.72□□□□□ -1.65
KRT78Q8N1N4 RNU2-15P-201ENST00000410692 191 ntBASIC4.72□□□□□ -1.65
KRT78Q8N1N4 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.72□□□□□ -1.65
KRT78Q8N1N4 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.72□□□□□ -1.65
KRT78Q8N1N4 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.72□□□□□ -1.65
KRT78Q8N1N4 RPL23AP27-201ENST00000415161 451 ntBASIC4.72□□□□□ -1.65
KRT78Q8N1N4 AC069213.2-201ENST00000420238 366 ntBASIC4.72□□□□□ -1.65
KRT78Q8N1N4 OFD1P18Y-201ENST00000420889 959 ntBASIC4.72□□□□□ -1.65
KRT78Q8N1N4 BX510359.3-201ENST00000422168 306 ntBASIC4.72□□□□□ -1.65
KRT78Q8N1N4 AL592293.2-201ENST00000422292 996 ntBASIC4.72□□□□□ -1.65
KRT78Q8N1N4 RPS27AP7-201ENST00000422792 455 ntBASIC4.72□□□□□ -1.65
KRT78Q8N1N4 PSMA6P3-201ENST00000428242 164 ntBASIC4.72□□□□□ -1.65
KRT78Q8N1N4 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.72□□□□□ -1.65
KRT78Q8N1N4 RHOT1P3-201ENST00000436571 331 ntBASIC4.72□□□□□ -1.65
KRT78Q8N1N4 MTND5P14-201ENST00000441481 1267 ntBASIC4.72□□□□□ -1.65
KRT78Q8N1N4 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.72□□□□□ -1.65
KRT78Q8N1N4 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.72□□□□□ -1.65
KRT78Q8N1N4 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms