Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 MIR331-201ENST00000362302 94 ntBASIC4.08□□□□□ -1.76
BEST3Q8N1M1 RNU1-85P-201ENST00000364127 164 ntBASIC4.08□□□□□ -1.76
BEST3Q8N1M1 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 LAP3P1-201ENST00000403648 294 ntBASIC4.08□□□□□ -1.76
BEST3Q8N1M1 AC068533.2-201ENST00000411872 306 ntBASIC4.08□□□□□ -1.76
BEST3Q8N1M1 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 TIMM9P2-201ENST00000419324 266 ntBASIC4.08□□□□□ -1.76
BEST3Q8N1M1 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 PTP4A1P5-201ENST00000420305 455 ntBASIC4.08□□□□□ -1.76
BEST3Q8N1M1 UBE2V1P1-201ENST00000430836 445 ntBASIC4.08□□□□□ -1.76
BEST3Q8N1M1 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 NUTF2P3-201ENST00000448540 384 ntBASIC4.08□□□□□ -1.76
BEST3Q8N1M1 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 AL672167.3-201ENST00000465951 960 ntBASIC4.08□□□□□ -1.76
BEST3Q8N1M1 AC013828.1-201ENST00000481845 158 ntBASIC4.08□□□□□ -1.76
BEST3Q8N1M1 LINC00888-204ENST00000487386 421 ntBASIC4.08□□□□□ -1.76
BEST3Q8N1M1 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 AC008088.1-201ENST00000580993 280 ntBASIC4.08□□□□□ -1.76
BEST3Q8N1M1 MIR4999-201ENST00000585029 91 ntBASIC4.08□□□□□ -1.76
BEST3Q8N1M1 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 AC092653.1-201ENST00000608509 531 ntBASIC4.08□□□□□ -1.76
BEST3Q8N1M1 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 uc_338.13-201ENST00000618243 179 ntBASIC4.08□□□□□ -1.76
BEST3Q8N1M1 AL603755.1-201ENST00000619504 163 ntBASIC4.08□□□□□ -1.76
BEST3Q8N1M1 AC068831.8-201ENST00000620171 435 ntBASIC4.08□□□□□ -1.76
BEST3Q8N1M1 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 AC103706.2-201ENST00000638080 240 ntBASIC4.08□□□□□ -1.76
BEST3Q8N1M1 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
BEST3Q8N1M1 AC009951.1-201ENST00000623674 2614 ntBASIC4.08□□□□□ -1.76
BEST3Q8N1M1 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 NXPH1-205ENST00000602349 1953 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 ZNF542P-204ENST00000482727 1305 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 RNU6-216P-201ENST00000363282 104 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 RNU6-931P-201ENST00000363850 107 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 RN7SKP227-201ENST00000364445 330 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 RNU6-441P-201ENST00000384545 106 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 ATP5F1P3-201ENST00000397213 657 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 RNU4-72P-201ENST00000410754 173 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 RPL23AP26-201ENST00000412728 464 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 AC098592.1-201ENST00000419352 333 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 AC062016.2-201ENST00000420950 676 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 RPL30P3-201ENST00000424262 333 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 AC234781.2-201ENST00000426370 994 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 RPL36P19-201ENST00000430744 301 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 AL365396.1-201ENST00000430854 671 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 AC069285.2-201ENST00000440210 275 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 RSL24D1P3-201ENST00000449255 495 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 NUTF2P7-201ENST00000453086 375 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 APOOP2-201ENST00000461561 539 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 RPL7P38-201ENST00000488396 739 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 AC110792.2-201ENST00000510278 224 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 SNORD116-26-201ENST00000516006 96 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 SNORA31.9-201ENST00000516429 84 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 MYL12AP1-201ENST00000518490 515 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.07□□□□□ -1.76
BEST3Q8N1M1 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 AP000790.1-201ENST00000528891 737 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 CYCSP29-201ENST00000533731 318 ntBASIC4.07□□□□□ -1.76
BEST3Q8N1M1 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms