Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC005532.2-201ENST00000467154 373 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 RPL31P50-201ENST00000471002 296 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 AC087312.1-201ENST00000471411 480 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 RN7SL222P-201ENST00000476452 299 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 RPS4XP20-201ENST00000505751 772 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 AC018710.1-201ENST00000506509 158 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 AC114786.4-201ENST00000508771 728 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 CYCSP28-201ENST00000534284 321 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 AC009852.2-201ENST00000567898 485 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 MIR4675-201ENST00000577898 77 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 UBE2V2P2-201ENST00000587677 504 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 AC060780.3-201ENST00000589464 80 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 AL359999.1-201ENST00000604513 294 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 AC011816.2-201ENST00000607089 556 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 MIR6719-201ENST00000622428 87 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 AP000542.2-201ENST00000623199 6179 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 AC109780.1-201ENST00000451768 1344 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 PROS2P-201ENST00000474651 1951 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 RPL23P2-201ENST00000320371 421 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 SNORA70.6-201ENST00000383934 134 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 RNU6-1103P-201ENST00000384150 107 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 ARF4P3-201ENST00000397387 509 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 DUTP5-201ENST00000406790 469 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 RN7SKP213-201ENST00000410746 298 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 RN7SKP126-201ENST00000411143 300 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 DPPA2P3-201ENST00000411853 655 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 HMGB3P20-201ENST00000417997 600 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 MTCO2P11-201ENST00000431069 680 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 AC104634.1-201ENST00000452720 462 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 Z92846.1-201ENST00000456203 268 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 MTCO3P2-201ENST00000457365 171 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 AC026410.2-201ENST00000460281 156 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 RPL21P6-201ENST00000479171 504 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 AC013356.1-201ENST00000489027 564 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 AC022133.1-201ENST00000490961 571 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 AC091912.1-201ENST00000511351 248 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 Y_RNA.672-201ENST00000516289 104 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 RNU6-1003P-201ENST00000517099 105 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 AC123904.3-201ENST00000547218 814 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 AC008127.2-201ENST00000549925 1075 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 ANP32BP3-201ENST00000559213 706 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 HSPE1P3-201ENST00000559254 309 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 AL845331.3-202ENST00000562856 261 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 AC245014.2-201ENST00000603689 287 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 AL391646.1-201ENST00000603860 190 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 AC007363.1-201ENST00000604736 620 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 AC246785.4-201ENST00000605374 287 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 AP001330.5-201ENST00000607176 411 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 AL161734.1-201ENST00000609720 557 ntBASIC5.18□□□□□ -1.58
TRIM48Q8IWZ4 AC019193.2-201ENST00000610012 634 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms