Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SNRPGP18-201ENST00000553000 214 ntBASIC6.52□□□□□ -1.37
RNF135Q8IUD6 AC091078.2-201ENST00000557145 559 ntBASIC6.52□□□□□ -1.37
RNF135Q8IUD6 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.52□□□□□ -1.37
RNF135Q8IUD6 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
RNF135Q8IUD6 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF135Q8IUD6 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.52□□□□□ -1.37
RNF135Q8IUD6 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF135Q8IUD6 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC6.52□□□□□ -1.37
RNF135Q8IUD6 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF135Q8IUD6 AC245517.5-201ENST00000611529 162 ntBASIC6.52□□□□□ -1.37
RNF135Q8IUD6 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.52□□□□□ -1.37
RNF135Q8IUD6 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF135Q8IUD6 AC022034.1-201ENST00000512867 2156 ntBASIC6.52□□□□□ -1.37
RNF135Q8IUD6 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
RNF135Q8IUD6 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF135Q8IUD6 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF135Q8IUD6 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RNF135Q8IUD6 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.52□□□□□ -1.37
RNF135Q8IUD6 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF135Q8IUD6 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RNF135Q8IUD6 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RNF135Q8IUD6 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RNF135Q8IUD6 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC6.52□□□□□ -1.37
RNF135Q8IUD6 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF135Q8IUD6 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RNF135Q8IUD6 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 MTCO1P7-201ENST00000419523 1542 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 RN7SKP162-201ENST00000363605 345 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 U3.11-201ENST00000364476 212 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 RNA5SP132-201ENST00000364725 118 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 MDM4-202ENST00000367180 547 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 RNU6-1293P-201ENST00000384077 107 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 RNU6-1226P-201ENST00000384317 107 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 RNU6-1222P-201ENST00000384615 107 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 AL592114.1-201ENST00000403842 483 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 RPS3AP2-201ENST00000407190 754 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 MIR548F5-201ENST00000408421 86 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 MIR548F4-201ENST00000408515 105 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 RNU2-29P-201ENST00000410423 189 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 RNU4-34P-201ENST00000410431 124 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 PMCHL1-202ENST00000423102 261 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 RPL7L1P10-201ENST00000427790 463 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 BX323845.3-201ENST00000428215 527 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 AC091685.2-201ENST00000454924 864 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 AC128716.1-201ENST00000475129 166 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 AC231760.1-201ENST00000498002 260 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 AC092436.1-201ENST00000506450 503 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 AC093303.1-201ENST00000514549 295 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 AC104057.1-201ENST00000515547 497 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 MYL12AP1-201ENST00000518490 515 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 AC022634.1-201ENST00000520765 532 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 AC100784.1-201ENST00000522790 310 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 AC063950.1-201ENST00000552036 308 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 HMGN2P47-201ENST00000559378 272 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 SULT1C2P2-201ENST00000562517 294 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 MIR4775-201ENST00000581168 75 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 MIR4424-201ENST00000585257 86 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 AC011477.5-201ENST00000586571 259 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 AC103710.2-201ENST00000609912 942 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 RNU6-156P-201ENST00000621869 107 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 AC244517.12-201ENST00000623581 663 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 AC135068.12-201ENST00000637370 931 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 HSPD1P8-201ENST00000400121 1658 ntBASIC6.51□□□□□ -1.37
RNF135Q8IUD6 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF135Q8IUD6 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RNF135Q8IUD6 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RNF135Q8IUD6 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms