Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 MIR7702-201ENST00000621931 59 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 AC039056.2-201ENST00000622261 511 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 AP005264.7-201ENST00000625003 745 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC2.54□□□□□ -2
SCXQ7RTU7 U6.107-201ENST00000637108 79 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SCXQ7RTU7 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC2.54□□□□□ -2
SCXQ7RTU7 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SCXQ7RTU7 AC105074.1-201ENST00000623380 3095 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SCXQ7RTU7 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC2.54□□□□□ -2
SCXQ7RTU7 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC2.53□□□□□ -2
SCXQ7RTU7 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2
SCXQ7RTU7 PABPC1P7-201ENST00000413177 1513 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC2.53□□□□□ -2
SCXQ7RTU7 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC2.53□□□□□ -2
SCXQ7RTU7 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC2.53□□□□□ -2
SCXQ7RTU7 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
SCXQ7RTU7 ZNF37BP-203ENST00000452306 1352 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 RPS4XP5-202ENST00000449995 1334 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SCXQ7RTU7 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
SCXQ7RTU7 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.53□□□□□ -2
SCXQ7RTU7 RNA5SP295-201ENST00000362655 121 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 RNU1-18P-201ENST00000363062 164 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 RNU6-213P-201ENST00000384051 104 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 EIF5P1-201ENST00000400019 1231 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 PGBD4P8-201ENST00000412993 562 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 ZNF736P2Y-201ENST00000416040 1279 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC2.53□□□□□ -2
SCXQ7RTU7 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC2.53□□□□□ -2
SCXQ7RTU7 MTCYBP24-201ENST00000420387 1106 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.53□□□□□ -2
SCXQ7RTU7 AC069157.1-201ENST00000421749 137 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.53□□□□□ -2
SCXQ7RTU7 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.53□□□□□ -2
SCXQ7RTU7 AC011742.1-201ENST00000431448 434 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 GOT2P5-201ENST00000433995 546 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.53□□□□□ -2
SCXQ7RTU7 AL500522.2-201ENST00000448562 343 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 RPL7P15-201ENST00000461190 712 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 AC091564.1-201ENST00000464563 479 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 CABYRP1-201ENST00000465493 1045 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 AC012181.1-201ENST00000479895 423 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 AC073522.1-201ENST00000483312 377 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC2.53□□□□□ -2
SCXQ7RTU7 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.53□□□□□ -2
SCXQ7RTU7 RN7SL323P-201ENST00000494712 295 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 RPL31P61-201ENST00000496160 376 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 BTF3L4P4-201ENST00000506381 449 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC2.53□□□□□ -2
SCXQ7RTU7 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.53□□□□□ -2
SCXQ7RTU7 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC2.53□□□□□ -2
SCXQ7RTU7 CIR1P1-201ENST00000524055 1133 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.53□□□□□ -2
SCXQ7RTU7 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.53□□□□□ -2
SCXQ7RTU7 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC2.53□□□□□ -2
SCXQ7RTU7 CYCSP30-201ENST00000546447 172 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 AC091516.1-201ENST00000549191 703 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC2.53□□□□□ -2
SCXQ7RTU7 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC2.53□□□□□ -2
SCXQ7RTU7 MIR4444-1-201ENST00000581696 74 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 AC012417.1-201ENST00000582307 1039 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 MIR4444-2-201ENST00000584390 74 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.53□□□□□ -2
SCXQ7RTU7 AC022146.1-201ENST00000595307 847 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 AC015726.1-201ENST00000602353 681 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 AC008739.3-201ENST00000603262 127 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 AC004775.1-201ENST00000607389 753 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.53□□□□□ -2
SCXQ7RTU7 MIR6075-201ENST00000620782 95 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.53□□□□□ -2
SCXQ7RTU7 AL773545.4-201ENST00000637262 310 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 AL513478.4-201ENST00000641636 310 ntBASIC2.53□□□□□ -2
SCXQ7RTU7 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
SCXQ7RTU7 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
SCXQ7RTU7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SCXQ7RTU7 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SCXQ7RTU7 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SCXQ7RTU7 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SCXQ7RTU7 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SCXQ7RTU7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SCXQ7RTU7 MTND4P8-201ENST00000514997 1362 ntBASIC2.52□□□□□ -2.01
SCXQ7RTU7 MTND4P34-201ENST00000572715 1371 ntBASIC2.52□□□□□ -2.01
SCXQ7RTU7 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SCXQ7RTU7 RNA5SP124-201ENST00000362739 110 ntBASIC2.52□□□□□ -2.01
SCXQ7RTU7 RNU6-252P-201ENST00000363232 107 ntBASIC2.52□□□□□ -2.01
SCXQ7RTU7 RNA5SP97-201ENST00000365006 84 ntBASIC2.52□□□□□ -2.01
SCXQ7RTU7 RNU6-629P-201ENST00000384061 103 ntBASIC2.52□□□□□ -2.01
SCXQ7RTU7 MIR30B-201ENST00000384850 88 ntBASIC2.52□□□□□ -2.01
SCXQ7RTU7 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.52□□□□□ -2.01
SCXQ7RTU7 RN7SKP156-201ENST00000410308 342 ntBASIC2.52□□□□□ -2.01
SCXQ7RTU7 TCEA1P2-201ENST00000420496 906 ntBASIC2.52□□□□□ -2.01
SCXQ7RTU7 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.52□□□□□ -2.01
SCXQ7RTU7 IFNNP1-201ENST00000429219 553 ntBASIC2.52□□□□□ -2.01
SCXQ7RTU7 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC2.52□□□□□ -2.01
SCXQ7RTU7 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC2.52□□□□□ -2.01
SCXQ7RTU7 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC2.52□□□□□ -2.01
SCXQ7RTU7 AC092809.1-201ENST00000441469 474 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms