Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.88□□□□□ -1.79
RFWD3Q6PCD5 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RFWD3Q6PCD5 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 RNU6-925P-201ENST00000384629 104 ntBASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 AC007066.1-201ENST00000392902 381 ntBASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 RPL21P17-201ENST00000397467 475 ntBASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 AL355615.1-201ENST00000406187 641 ntBASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 HMGB3P31-201ENST00000413333 595 ntBASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 VTA1P1-201ENST00000414044 866 ntBASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 AC002075.2-201ENST00000425207 252 ntBASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 SETD6P1-201ENST00000444575 317 ntBASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 AC007537.2-201ENST00000472093 511 ntBASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 AC012170.1-201ENST00000495139 359 ntBASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 AP002812.1-201ENST00000495378 474 ntBASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 CAB39P1-201ENST00000502277 460 ntBASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 AC093801.2-201ENST00000503966 1050 ntBASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 RNU1-95P-201ENST00000516357 160 ntBASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 RNU1-128P-201ENST00000516704 160 ntBASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 AC087894.1-201ENST00000538359 518 ntBASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 AC009101.1-201ENST00000568135 242 ntBASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 MIR5187-201ENST00000583479 76 ntBASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 AC011458.1-201ENST00000604034 617 ntBASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 AL137849.1-201ENST00000604767 169 ntBASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 RNU1-30P-201ENST00000606575 163 ntBASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 AP000240.1-201ENST00000609910 452 ntBASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 AL392048.1-201ENST00000613946 534 ntBASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 uc_338.9-201ENST00000617424 182 ntBASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 EXOC5P1-201ENST00000510543 1969 ntBASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
RFWD3Q6PCD5 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 SNORA5A-201ENST00000384111 134 ntBASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 RNU6-207P-201ENST00000384137 107 ntBASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 MIR670-201ENST00000390142 98 ntBASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 HSPE1P8-201ENST00000406997 288 ntBASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 AC013404.1-201ENST00000413068 249 ntBASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 LINC01881-201ENST00000416103 412 ntBASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 AL035423.1-201ENST00000420331 213 ntBASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 TCEA1P2-201ENST00000420496 906 ntBASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 MTND2P9-201ENST00000422293 931 ntBASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 AC073310.1-201ENST00000423226 1033 ntBASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 DEFB130D-201ENST00000426866 237 ntBASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 FO393414.1-201ENST00000428697 1184 ntBASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 TRBV12-2-201ENST00000489763 344 ntBASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 AC111193.1-201ENST00000504097 155 ntBASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 RNA5SP309-201ENST00000516670 106 ntBASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 AC025260.1-201ENST00000548858 430 ntBASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 AL390816.3-201ENST00000604527 1066 ntBASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 AC006946.3-201ENST00000609791 756 ntBASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 AC008121.2-201ENST00000614647 523 ntBASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 AC119674.1-207ENST00000641355 633 ntBASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
RFWD3Q6PCD5 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RFWD3Q6PCD5 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RFWD3Q6PCD5 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RFWD3Q6PCD5 AL139811.1-201ENST00000424779 2299 ntBASIC3.85□□□□□ -1.79
RFWD3Q6PCD5 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RFWD3Q6PCD5 RNA5SP51-201ENST00000364750 119 ntBASIC3.85□□□□□ -1.79
RFWD3Q6PCD5 MIR200C-201ENST00000384980 68 ntBASIC3.85□□□□□ -1.79
RFWD3Q6PCD5 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.85□□□□□ -1.79
RFWD3Q6PCD5 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RFWD3Q6PCD5 AC127526.1-201ENST00000417526 366 ntBASIC3.85□□□□□ -1.79
RFWD3Q6PCD5 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.85□□□□□ -1.79
RFWD3Q6PCD5 AL389915.1-201ENST00000422463 466 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms