Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 COX6CP12-201ENST00000446748 202 ntBASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 RPL39P6-201ENST00000448289 150 ntBASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 AC239809.1-201ENST00000450470 217 ntBASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 RPL5P32-201ENST00000454085 879 ntBASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 AURKAPS2-201ENST00000454983 333 ntBASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 SNRPGP9-201ENST00000456025 225 ntBASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 OR52A4P-201ENST00000472867 958 ntBASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 AC006463.2-201ENST00000473326 348 ntBASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 OR6C7P-201ENST00000547875 934 ntBASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 FKBP1BP1-201ENST00000553366 325 ntBASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 MIR5699-201ENST00000578903 90 ntBASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 ZNF415P1-201ENST00000582279 1166 ntBASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 AC022146.1-201ENST00000595307 847 ntBASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 AL512782.1-201ENST00000603093 364 ntBASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 AC078899.5-201ENST00000612475 178 ntBASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 AC006338.2-201ENST00000616864 791 ntBASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 MIR7703-201ENST00000620784 77 ntBASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.65□□□□□ -1.67
PTCHD3Q3KNS1 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 AL672167.1-205ENST00000641112 3080 ntBASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 RNU1-85P-201ENST00000364127 164 ntBASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 RNU6-657P-201ENST00000383904 107 ntBASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 AL592291.1-201ENST00000403830 352 ntBASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 ARL4AP5-201ENST00000404372 599 ntBASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 AP000580.1-201ENST00000404439 358 ntBASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 RPL31P52-201ENST00000407532 367 ntBASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 UBTFL3-201ENST00000418934 1024 ntBASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 VN1R10P-201ENST00000447106 875 ntBASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 AC092757.1-201ENST00000467293 467 ntBASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 UBTFL6-201ENST00000477929 1024 ntBASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 FTH1P24-201ENST00000503502 462 ntBASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 AC026412.2-201ENST00000512270 1075 ntBASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 AC018797.3-201ENST00000513388 1241 ntBASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 AC133555.2-201ENST00000550213 292 ntBASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 HSPE1P3-201ENST00000559254 309 ntBASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 AC018552.3-201ENST00000567416 561 ntBASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 AP001094.1-201ENST00000579805 193 ntBASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 MIR4637-201ENST00000582405 84 ntBASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 AC005191.1-201ENST00000603950 358 ntBASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 AL136363.2-201ENST00000604173 851 ntBASIC4.64□□□□□ -1.67
PTCHD3Q3KNS1 AL391358.1-201ENST00000605342 190 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms