Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
USF2Q15853 RNU4-65P-201ENST00000410473 140 ntBASIC3.12□□□□□ -1.91
USF2Q15853 RAD23BP2-201ENST00000416003 1207 ntBASIC3.12□□□□□ -1.91
USF2Q15853 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.12□□□□□ -1.91
USF2Q15853 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.12□□□□□ -1.91
USF2Q15853 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
USF2Q15853 RPS4XP4-201ENST00000443195 763 ntBASIC3.12□□□□□ -1.91
USF2Q15853 NUTF2P3-201ENST00000448540 384 ntBASIC3.12□□□□□ -1.91
USF2Q15853 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.12□□□□□ -1.91
USF2Q15853 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.12□□□□□ -1.91
USF2Q15853 RPS4XP22-201ENST00000480755 780 ntBASIC3.12□□□□□ -1.91
USF2Q15853 RN7SL604P-201ENST00000492589 296 ntBASIC3.12□□□□□ -1.91
USF2Q15853 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.12□□□□□ -1.91
USF2Q15853 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.12□□□□□ -1.91
USF2Q15853 AC008885.2-201ENST00000509506 930 ntBASIC3.12□□□□□ -1.91
USF2Q15853 AC026726.1-201ENST00000512859 601 ntBASIC3.12□□□□□ -1.91
USF2Q15853 RN7SKP60-201ENST00000516985 239 ntBASIC3.12□□□□□ -1.91
USF2Q15853 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.12□□□□□ -1.91
USF2Q15853 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.12□□□□□ -1.91
USF2Q15853 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.12□□□□□ -1.91
USF2Q15853 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.12□□□□□ -1.91
USF2Q15853 AC022968.1-201ENST00000567372 442 ntBASIC3.12□□□□□ -1.91
USF2Q15853 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.12□□□□□ -1.91
USF2Q15853 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.12□□□□□ -1.91
USF2Q15853 AC025627.2-201ENST00000576220 160 ntBASIC3.12□□□□□ -1.91
USF2Q15853 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.12□□□□□ -1.91
USF2Q15853 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.12□□□□□ -1.91
USF2Q15853 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.12□□□□□ -1.91
USF2Q15853 BDH2P1-201ENST00000602288 736 ntBASIC3.12□□□□□ -1.91
USF2Q15853 AC113368.1-201ENST00000603736 382 ntBASIC3.12□□□□□ -1.91
USF2Q15853 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.12□□□□□ -1.91
USF2Q15853 AL110115.1-201ENST00000614396 364 ntBASIC3.12□□□□□ -1.91
USF2Q15853 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.12□□□□□ -1.91
USF2Q15853 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.12□□□□□ -1.91
USF2Q15853 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.12□□□□□ -1.91
USF2Q15853 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
USF2Q15853 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.12□□□□□ -1.91
USF2Q15853 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
USF2Q15853 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
USF2Q15853 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
USF2Q15853 MTND5P27-201ENST00000428871 1720 ntBASIC3.11□□□□□ -1.91
USF2Q15853 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
USF2Q15853 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
USF2Q15853 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
USF2Q15853 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
USF2Q15853 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
USF2Q15853 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
USF2Q15853 SNORA60-201ENST00000362396 134 ntBASIC3.11□□□□□ -1.91
USF2Q15853 SNORA27.3-201ENST00000364937 134 ntBASIC3.11□□□□□ -1.91
USF2Q15853 ATP5F1P4-201ENST00000397288 746 ntBASIC3.11□□□□□ -1.91
USF2Q15853 SFR1P1-201ENST00000403720 688 ntBASIC3.11□□□□□ -1.91
USF2Q15853 MIR1251-201ENST00000408552 70 ntBASIC3.11□□□□□ -1.91
USF2Q15853 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.11□□□□□ -1.91
USF2Q15853 AC023141.6-201ENST00000429418 337 ntBASIC3.11□□□□□ -1.91
USF2Q15853 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.11□□□□□ -1.91
USF2Q15853 ELOCP3-201ENST00000439303 348 ntBASIC3.11□□□□□ -1.91
USF2Q15853 UBE2V1P5-201ENST00000440070 405 ntBASIC3.11□□□□□ -1.91
USF2Q15853 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.11□□□□□ -1.91
USF2Q15853 RPS26P21-201ENST00000475397 348 ntBASIC3.11□□□□□ -1.91
USF2Q15853 RN7SL271P-201ENST00000487601 295 ntBASIC3.11□□□□□ -1.91
USF2Q15853 AC092185.1-201ENST00000491371 97 ntBASIC3.11□□□□□ -1.91
USF2Q15853 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
USF2Q15853 RNF138P1-201ENST00000502765 546 ntBASIC3.11□□□□□ -1.91
USF2Q15853 AC021146.5-201ENST00000503544 545 ntBASIC3.11□□□□□ -1.91
USF2Q15853 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.11□□□□□ -1.91
USF2Q15853 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.11□□□□□ -1.91
USF2Q15853 AC108043.1-201ENST00000512696 574 ntBASIC3.11□□□□□ -1.91
USF2Q15853 ARL2BPP6-201ENST00000512757 439 ntBASIC3.11□□□□□ -1.91
USF2Q15853 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
USF2Q15853 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.11□□□□□ -1.91
USF2Q15853 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.11□□□□□ -1.91
USF2Q15853 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
USF2Q15853 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.11□□□□□ -1.91
USF2Q15853 AC053481.4-201ENST00000583164 216 ntBASIC3.11□□□□□ -1.91
USF2Q15853 AP001029.3-201ENST00000588063 596 ntBASIC3.11□□□□□ -1.91
USF2Q15853 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.11□□□□□ -1.91
USF2Q15853 AC103881.1-201ENST00000603476 538 ntBASIC3.11□□□□□ -1.91
USF2Q15853 AC114781.5-201ENST00000615297 108 ntBASIC3.11□□□□□ -1.91
USF2Q15853 AC018926.3-201ENST00000618841 406 ntBASIC3.11□□□□□ -1.91
USF2Q15853 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.11□□□□□ -1.91
USF2Q15853 AC011944.2-201ENST00000624440 683 ntBASIC3.11□□□□□ -1.91
USF2Q15853 MIR3653-201ENST00000625572 110 ntBASIC3.11□□□□□ -1.91
USF2Q15853 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
USF2Q15853 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
USF2Q15853 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
USF2Q15853 MAPK10-362ENST00000641864 4484 ntBASIC3.11□□□□□ -1.91
USF2Q15853 SAGE4P-201ENST00000442271 3381 ntBASIC3.11□□□□□ -1.91
USF2Q15853 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.11□□□□□ -1.91
USF2Q15853 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
USF2Q15853 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.1□□□□□ -1.91
USF2Q15853 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
USF2Q15853 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.1□□□□□ -1.91
USF2Q15853 RPL32P3-201ENST00000359025 275 ntBASIC3.1□□□□□ -1.91
USF2Q15853 RNU11-4P-201ENST00000391149 133 ntBASIC3.1□□□□□ -1.91
USF2Q15853 HMGB3P18-201ENST00000406327 590 ntBASIC3.1□□□□□ -1.91
USF2Q15853 AL592293.2-201ENST00000422292 996 ntBASIC3.1□□□□□ -1.91
USF2Q15853 CHIAP3-201ENST00000423668 1133 ntBASIC3.1□□□□□ -1.91
USF2Q15853 RPL23AP38-201ENST00000423801 469 ntBASIC3.1□□□□□ -1.91
USF2Q15853 AC002075.2-201ENST00000425207 252 ntBASIC3.1□□□□□ -1.91
USF2Q15853 AL445528.1-201ENST00000426330 420 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms