Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 RNU1-64P-201ENST00000365443 163 ntBASIC2.69□□□□□ -1.98
HMGN3Q15651 HMGB1P13-201ENST00000406019 642 ntBASIC2.69□□□□□ -1.98
HMGN3Q15651 SNORD88.1-201ENST00000408684 91 ntBASIC2.69□□□□□ -1.98
HMGN3Q15651 RPS29P4-201ENST00000414733 161 ntBASIC2.69□□□□□ -1.98
HMGN3Q15651 AL139281.1-201ENST00000422120 335 ntBASIC2.69□□□□□ -1.98
HMGN3Q15651 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.69□□□□□ -1.98
HMGN3Q15651 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC2.69□□□□□ -1.98
HMGN3Q15651 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HMGN3Q15651 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.69□□□□□ -1.98
HMGN3Q15651 HMGB3P6-201ENST00000444896 598 ntBASIC2.69□□□□□ -1.98
HMGN3Q15651 RPL39P40-201ENST00000445481 146 ntBASIC2.69□□□□□ -1.98
HMGN3Q15651 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC2.69□□□□□ -1.98
HMGN3Q15651 RPL26P28-201ENST00000451325 435 ntBASIC2.69□□□□□ -1.98
HMGN3Q15651 AL590639.1-201ENST00000456484 337 ntBASIC2.69□□□□□ -1.98
HMGN3Q15651 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.69□□□□□ -1.98
HMGN3Q15651 AC006483.1-201ENST00000487308 313 ntBASIC2.69□□□□□ -1.98
HMGN3Q15651 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.69□□□□□ -1.98
HMGN3Q15651 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.69□□□□□ -1.98
HMGN3Q15651 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.69□□□□□ -1.98
HMGN3Q15651 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.69□□□□□ -1.98
HMGN3Q15651 TMEM248P1-201ENST00000510579 951 ntBASIC2.69□□□□□ -1.98
HMGN3Q15651 SNORD116-26-201ENST00000516006 96 ntBASIC2.69□□□□□ -1.98
HMGN3Q15651 RNU1-45P-201ENST00000517191 141 ntBASIC2.69□□□□□ -1.98
HMGN3Q15651 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.69□□□□□ -1.98
HMGN3Q15651 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.69□□□□□ -1.98
HMGN3Q15651 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.69□□□□□ -1.98
HMGN3Q15651 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.69□□□□□ -1.98
HMGN3Q15651 MIR5186-201ENST00000577504 120 ntBASIC2.69□□□□□ -1.98
HMGN3Q15651 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.69□□□□□ -1.98
HMGN3Q15651 AC012119.1-201ENST00000603184 222 ntBASIC2.69□□□□□ -1.98
HMGN3Q15651 AC073657.2-201ENST00000605661 303 ntBASIC2.69□□□□□ -1.98
HMGN3Q15651 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC2.69□□□□□ -1.98
HMGN3Q15651 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.69□□□□□ -1.98
HMGN3Q15651 AC012442.3-202ENST00000636742 206 ntBASIC2.69□□□□□ -1.98
HMGN3Q15651 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
HMGN3Q15651 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.68□□□□□ -1.98
HMGN3Q15651 AC007256.1-201ENST00000392253 2765 ntBASIC2.68□□□□□ -1.98
HMGN3Q15651 Z83843.1-201ENST00000604070 3685 ntBASIC2.68□□□□□ -1.98
HMGN3Q15651 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.68□□□□□ -1.98
HMGN3Q15651 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
HMGN3Q15651 AC234772.1-201ENST00000377927 937 ntBASIC2.68□□□□□ -1.98
HMGN3Q15651 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
HMGN3Q15651 MIR554-201ENST00000384874 96 ntBASIC2.68□□□□□ -1.98
HMGN3Q15651 HSFY4P-201ENST00000415994 1181 ntBASIC2.68□□□□□ -1.98
HMGN3Q15651 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.68□□□□□ -1.98
HMGN3Q15651 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.68□□□□□ -1.98
HMGN3Q15651 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC2.68□□□□□ -1.98
HMGN3Q15651 HMGB3P21-201ENST00000452483 547 ntBASIC2.68□□□□□ -1.98
HMGN3Q15651 GSTA11P-201ENST00000452866 669 ntBASIC2.68□□□□□ -1.98
HMGN3Q15651 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC2.68□□□□□ -1.98
HMGN3Q15651 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.68□□□□□ -1.98
HMGN3Q15651 AC092593.2-201ENST00000513866 913 ntBASIC2.68□□□□□ -1.98
HMGN3Q15651 MTCO1P30-201ENST00000515244 580 ntBASIC2.68□□□□□ -1.98
HMGN3Q15651 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.68□□□□□ -1.98
HMGN3Q15651 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.68□□□□□ -1.98
HMGN3Q15651 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.68□□□□□ -1.98
HMGN3Q15651 AC131902.3-201ENST00000611767 581 ntBASIC2.68□□□□□ -1.98
HMGN3Q15651 AC005156.1-201ENST00000613371 573 ntBASIC2.68□□□□□ -1.98
HMGN3Q15651 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.68□□□□□ -1.98
HMGN3Q15651 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.68□□□□□ -1.98
HMGN3Q15651 MIR4278-201ENST00000636094 69 ntBASIC2.68□□□□□ -1.98
HMGN3Q15651 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HMGN3Q15651 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HMGN3Q15651 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.68□□□□□ -1.98
HMGN3Q15651 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.68□□□□□ -1.98
HMGN3Q15651 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
HMGN3Q15651 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HMGN3Q15651 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
HMGN3Q15651 RNA5SP167-201ENST00000365461 116 ntBASIC2.67□□□□□ -1.98
HMGN3Q15651 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.67□□□□□ -1.98
HMGN3Q15651 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.67□□□□□ -1.98
HMGN3Q15651 AC013410.1-201ENST00000436223 1232 ntBASIC2.67□□□□□ -1.98
HMGN3Q15651 HSPE1P28-201ENST00000443139 211 ntBASIC2.67□□□□□ -1.98
HMGN3Q15651 RPL36AP33-201ENST00000450395 310 ntBASIC2.67□□□□□ -1.98
HMGN3Q15651 AC093392.2-201ENST00000450682 337 ntBASIC2.67□□□□□ -1.98
HMGN3Q15651 AC104308.1-201ENST00000454621 333 ntBASIC2.67□□□□□ -1.98
HMGN3Q15651 RN7SL542P-201ENST00000467147 294 ntBASIC2.67□□□□□ -1.98
HMGN3Q15651 RPL23AP11-201ENST00000475260 469 ntBASIC2.67□□□□□ -1.98
HMGN3Q15651 AGGF1P3-201ENST00000493675 1213 ntBASIC2.67□□□□□ -1.98
HMGN3Q15651 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.67□□□□□ -1.98
HMGN3Q15651 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.67□□□□□ -1.98
HMGN3Q15651 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.67□□□□□ -1.98
HMGN3Q15651 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.67□□□□□ -1.98
HMGN3Q15651 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.67□□□□□ -1.98
HMGN3Q15651 MIR4458-201ENST00000578872 75 ntBASIC2.67□□□□□ -1.98
HMGN3Q15651 MIR3922-201ENST00000585192 84 ntBASIC2.67□□□□□ -1.98
HMGN3Q15651 AC078899.3-201ENST00000599065 212 ntBASIC2.67□□□□□ -1.98
HMGN3Q15651 AL162713.1-201ENST00000604480 262 ntBASIC2.67□□□□□ -1.98
HMGN3Q15651 U3.45-201ENST00000607547 219 ntBASIC2.67□□□□□ -1.98
HMGN3Q15651 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC2.67□□□□□ -1.98
HMGN3Q15651 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.67□□□□□ -1.98
HMGN3Q15651 AL355365.1-201ENST00000616480 294 ntBASIC2.67□□□□□ -1.98
HMGN3Q15651 CFTRP2-201ENST00000634304 199 ntBASIC2.67□□□□□ -1.98
HMGN3Q15651 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
HMGN3Q15651 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HMGN3Q15651 AL356317.1-201ENST00000396110 1436 ntBASIC2.67□□□□□ -1.98
HMGN3Q15651 MTND5P24-201ENST00000438892 1767 ntBASIC2.66□□□□□ -1.98
HMGN3Q15651 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HMGN3Q15651 AF117829.1-206ENST00000621883 3802 ntBASIC2.66□□□□□ -1.98
HMGN3Q15651 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms