Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RNU6-1119P-201ENST00000384349 108 ntBASIC4.4□□□□□ -1.71
RAE1P78406 SNORA68.2-201ENST00000391263 128 ntBASIC4.4□□□□□ -1.71
RAE1P78406 VN1R8P-201ENST00000407739 893 ntBASIC4.4□□□□□ -1.71
RAE1P78406 AC007899.1-201ENST00000412776 775 ntBASIC4.4□□□□□ -1.71
RAE1P78406 AC004022.2-201ENST00000413824 193 ntBASIC4.4□□□□□ -1.71
RAE1P78406 AL139128.1-201ENST00000413921 941 ntBASIC4.4□□□□□ -1.71
RAE1P78406 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.4□□□□□ -1.71
RAE1P78406 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.4□□□□□ -1.71
RAE1P78406 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.4□□□□□ -1.71
RAE1P78406 AC004448.2-201ENST00000422360 586 ntBASIC4.4□□□□□ -1.71
RAE1P78406 AL389915.1-201ENST00000422463 466 ntBASIC4.4□□□□□ -1.71
RAE1P78406 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RAE1P78406 RPS3AP44-201ENST00000425466 790 ntBASIC4.4□□□□□ -1.71
RAE1P78406 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.4□□□□□ -1.71
RAE1P78406 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RAE1P78406 USP9YP29-201ENST00000445112 563 ntBASIC4.4□□□□□ -1.71
RAE1P78406 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.4□□□□□ -1.71
RAE1P78406 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.4□□□□□ -1.71
RAE1P78406 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.4□□□□□ -1.71
RAE1P78406 HIGD1AP8-201ENST00000453927 274 ntBASIC4.4□□□□□ -1.71
RAE1P78406 ISCUP1-201ENST00000454451 448 ntBASIC4.4□□□□□ -1.71
RAE1P78406 CFTRP1-201ENST00000456646 183 ntBASIC4.4□□□□□ -1.71
RAE1P78406 AC018638.3-201ENST00000461273 132 ntBASIC4.4□□□□□ -1.71
RAE1P78406 RN7SL329P-201ENST00000467740 299 ntBASIC4.4□□□□□ -1.71
RAE1P78406 AC087879.1-201ENST00000474343 374 ntBASIC4.4□□□□□ -1.71
RAE1P78406 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.4□□□□□ -1.71
RAE1P78406 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RAE1P78406 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.4□□□□□ -1.71
RAE1P78406 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.4□□□□□ -1.71
RAE1P78406 AC010625.1-201ENST00000511296 403 ntBASIC4.4□□□□□ -1.71
RAE1P78406 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.4□□□□□ -1.71
RAE1P78406 RNU6-150P-201ENST00000516237 95 ntBASIC4.4□□□□□ -1.71
RAE1P78406 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.4□□□□□ -1.71
RAE1P78406 AC008127.2-201ENST00000549925 1075 ntBASIC4.4□□□□□ -1.71
RAE1P78406 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.4□□□□□ -1.71
RAE1P78406 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.4□□□□□ -1.71
RAE1P78406 AC044860.2-201ENST00000561005 179 ntBASIC4.4□□□□□ -1.71
RAE1P78406 MIR4737-201ENST00000583979 81 ntBASIC4.4□□□□□ -1.71
RAE1P78406 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.4□□□□□ -1.71
RAE1P78406 AC083760.1-201ENST00000589621 670 ntBASIC4.4□□□□□ -1.71
RAE1P78406 AC087683.1-201ENST00000591187 441 ntBASIC4.4□□□□□ -1.71
RAE1P78406 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.4□□□□□ -1.71
RAE1P78406 AC012065.4-201ENST00000602445 679 ntBASIC4.4□□□□□ -1.71
RAE1P78406 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.4□□□□□ -1.71
RAE1P78406 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.4□□□□□ -1.71
RAE1P78406 AC068722.2-201ENST00000618734 544 ntBASIC4.4□□□□□ -1.71
RAE1P78406 MIR6853-201ENST00000619642 74 ntBASIC4.4□□□□□ -1.71
RAE1P78406 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.4□□□□□ -1.71
RAE1P78406 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RAE1P78406 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RAE1P78406 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
RAE1P78406 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.4□□□□□ -1.71
RAE1P78406 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RAE1P78406 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RAE1P78406 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
RAE1P78406 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.71
RAE1P78406 MTND4P4-201ENST00000439033 1366 ntBASIC4.4□□□□□ -1.71
RAE1P78406 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RAE1P78406 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RAE1P78406 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.39□□□□□ -1.71
RAE1P78406 AC010928.1-201ENST00000592477 1447 ntBASIC4.39□□□□□ -1.71
RAE1P78406 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.39□□□□□ -1.71
RAE1P78406 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RAE1P78406 EOGT-210ENST00000615922 1931 ntBASIC4.39□□□□□ -1.71
RAE1P78406 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.39□□□□□ -1.71
RAE1P78406 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RAE1P78406 MIR105-2-201ENST00000385083 81 ntBASIC4.39□□□□□ -1.71
RAE1P78406 DEFB108C-201ENST00000400154 252 ntBASIC4.39□□□□□ -1.71
RAE1P78406 AL023807.1-201ENST00000407932 359 ntBASIC4.39□□□□□ -1.71
RAE1P78406 RN7SKP267-201ENST00000410381 285 ntBASIC4.39□□□□□ -1.71
RAE1P78406 Y_RNA.619-201ENST00000410951 90 ntBASIC4.39□□□□□ -1.71
RAE1P78406 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.39□□□□□ -1.71
RAE1P78406 BX510359.2-201ENST00000417920 305 ntBASIC4.39□□□□□ -1.71
RAE1P78406 RPL21P91-201ENST00000429231 479 ntBASIC4.39□□□□□ -1.71
RAE1P78406 CEACAMP1-201ENST00000434624 1035 ntBASIC4.39□□□□□ -1.71
RAE1P78406 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.39□□□□□ -1.71
RAE1P78406 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.39□□□□□ -1.71
RAE1P78406 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.39□□□□□ -1.71
RAE1P78406 RPL36AP15-201ENST00000444514 266 ntBASIC4.39□□□□□ -1.71
RAE1P78406 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.39□□□□□ -1.71
RAE1P78406 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.39□□□□□ -1.71
RAE1P78406 SSXP1-201ENST00000453640 473 ntBASIC4.39□□□□□ -1.71
RAE1P78406 SUMO2P2-201ENST00000456482 255 ntBASIC4.39□□□□□ -1.71
RAE1P78406 SCARNA10-201ENST00000459255 330 ntBASIC4.39□□□□□ -1.71
RAE1P78406 RPS3AP41-201ENST00000462701 778 ntBASIC4.39□□□□□ -1.71
RAE1P78406 PPIAP21-201ENST00000464473 501 ntBASIC4.39□□□□□ -1.71
RAE1P78406 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
RAE1P78406 AC005726.1-201ENST00000494679 427 ntBASIC4.39□□□□□ -1.71
RAE1P78406 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.39□□□□□ -1.71
RAE1P78406 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.39□□□□□ -1.71
RAE1P78406 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.39□□□□□ -1.71
RAE1P78406 AC093809.1-201ENST00000509155 340 ntBASIC4.39□□□□□ -1.71
RAE1P78406 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.39□□□□□ -1.71
RAE1P78406 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.39□□□□□ -1.71
RAE1P78406 IGHV3-32-201ENST00000519182 355 ntBASIC4.39□□□□□ -1.71
RAE1P78406 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RAE1P78406 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RAE1P78406 AP000676.2-201ENST00000529711 301 ntBASIC4.39□□□□□ -1.71
RAE1P78406 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.39□□□□□ -1.71
RAE1P78406 AC068587.4-201ENST00000533893 186 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms