Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 Y_RNA.216-201ENST00000364205 93 ntBASIC5.28□□□□□ -1.56
YBX1P67809 RNA5SP132-201ENST00000364725 118 ntBASIC5.28□□□□□ -1.56
YBX1P67809 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.28□□□□□ -1.56
YBX1P67809 MIR551A-201ENST00000385042 96 ntBASIC5.28□□□□□ -1.56
YBX1P67809 RNU1-77P-201ENST00000390868 162 ntBASIC5.28□□□□□ -1.56
YBX1P67809 PPIAP9-201ENST00000403866 498 ntBASIC5.28□□□□□ -1.56
YBX1P67809 AL590290.1-201ENST00000405336 380 ntBASIC5.28□□□□□ -1.56
YBX1P67809 RN7SKP266-201ENST00000410232 287 ntBASIC5.28□□□□□ -1.56
YBX1P67809 RNU2-28P-201ENST00000410457 189 ntBASIC5.28□□□□□ -1.56
YBX1P67809 AC007394.1-201ENST00000421941 531 ntBASIC5.28□□□□□ -1.56
YBX1P67809 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.28□□□□□ -1.56
YBX1P67809 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.28□□□□□ -1.56
YBX1P67809 AC073465.2-201ENST00000440938 498 ntBASIC5.28□□□□□ -1.56
YBX1P67809 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.28□□□□□ -1.56
YBX1P67809 AC083798.1-201ENST00000472671 131 ntBASIC5.28□□□□□ -1.56
YBX1P67809 AC012123.2-201ENST00000485809 248 ntBASIC5.28□□□□□ -1.56
YBX1P67809 AC103851.1-201ENST00000506833 274 ntBASIC5.28□□□□□ -1.56
YBX1P67809 AC025674.1-201ENST00000507074 324 ntBASIC5.28□□□□□ -1.56
YBX1P67809 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.28□□□□□ -1.56
YBX1P67809 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC5.28□□□□□ -1.56
YBX1P67809 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.28□□□□□ -1.56
YBX1P67809 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.28□□□□□ -1.56
YBX1P67809 AP005597.4-201ENST00000526762 229 ntBASIC5.28□□□□□ -1.56
YBX1P67809 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC5.28□□□□□ -1.56
YBX1P67809 EIF4A2P5-201ENST00000529914 499 ntBASIC5.28□□□□□ -1.56
YBX1P67809 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.28□□□□□ -1.56
YBX1P67809 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.28□□□□□ -1.56
YBX1P67809 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
YBX1P67809 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.28□□□□□ -1.56
YBX1P67809 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC5.28□□□□□ -1.56
YBX1P67809 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.28□□□□□ -1.56
YBX1P67809 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.28□□□□□ -1.56
YBX1P67809 AC090502.2-201ENST00000549267 280 ntBASIC5.28□□□□□ -1.56
YBX1P67809 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.28□□□□□ -1.56
YBX1P67809 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.28□□□□□ -1.56
YBX1P67809 AC015720.2-201ENST00000567709 334 ntBASIC5.28□□□□□ -1.56
YBX1P67809 AC022884.3-201ENST00000579571 248 ntBASIC5.28□□□□□ -1.56
YBX1P67809 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.28□□□□□ -1.56
YBX1P67809 RNU6-87P-201ENST00000607561 108 ntBASIC5.28□□□□□ -1.56
YBX1P67809 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.28□□□□□ -1.56
YBX1P67809 AL133215.3-201ENST00000609801 448 ntBASIC5.28□□□□□ -1.56
YBX1P67809 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC5.28□□□□□ -1.56
YBX1P67809 AC024940.5-201ENST00000622889 474 ntBASIC5.28□□□□□ -1.56
YBX1P67809 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.28□□□□□ -1.56
YBX1P67809 TPTEP1-208ENST00000636884 213 ntBASIC5.28□□□□□ -1.56
YBX1P67809 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
YBX1P67809 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.28□□□□□ -1.56
YBX1P67809 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
YBX1P67809 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
YBX1P67809 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.28□□□□□ -1.56
YBX1P67809 AP002512.4-202ENST00000641599 4530 ntBASIC5.28□□□□□ -1.56
YBX1P67809 AC119744.1-201ENST00000454746 1715 ntBASIC5.28□□□□□ -1.56
YBX1P67809 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
YBX1P67809 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
YBX1P67809 AL606537.1-201ENST00000607258 2011 ntBASIC5.28□□□□□ -1.56
YBX1P67809 AC092376.2-201ENST00000622621 4116 ntBASIC5.28□□□□□ -1.56
YBX1P67809 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
YBX1P67809 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
YBX1P67809 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
YBX1P67809 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.27□□□□□ -1.57
YBX1P67809 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
YBX1P67809 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
YBX1P67809 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
YBX1P67809 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
YBX1P67809 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.27□□□□□ -1.57
YBX1P67809 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
YBX1P67809 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
YBX1P67809 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
YBX1P67809 RNU4-2-201ENST00000365668 141 ntBASIC5.27□□□□□ -1.57
YBX1P67809 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
YBX1P67809 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
YBX1P67809 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
YBX1P67809 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
YBX1P67809 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
YBX1P67809 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.27□□□□□ -1.57
YBX1P67809 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.27□□□□□ -1.57
YBX1P67809 OR3A2-201ENST00000408891 1076 ntBASIC5.27□□□□□ -1.57
YBX1P67809 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.27□□□□□ -1.57
YBX1P67809 RN7SKP32-201ENST00000410167 303 ntBASIC5.27□□□□□ -1.57
YBX1P67809 RN7SKP222-201ENST00000410651 315 ntBASIC5.27□□□□□ -1.57
YBX1P67809 RNU2-8P-201ENST00000410727 190 ntBASIC5.27□□□□□ -1.57
YBX1P67809 AC004987.3-201ENST00000413879 771 ntBASIC5.27□□□□□ -1.57
YBX1P67809 RPL26P29-201ENST00000415623 438 ntBASIC5.27□□□□□ -1.57
YBX1P67809 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.27□□□□□ -1.57
YBX1P67809 MRPL50P2-201ENST00000416821 482 ntBASIC5.27□□□□□ -1.57
YBX1P67809 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.27□□□□□ -1.57
YBX1P67809 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.27□□□□□ -1.57
YBX1P67809 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.27□□□□□ -1.57
YBX1P67809 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.27□□□□□ -1.57
YBX1P67809 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.27□□□□□ -1.57
YBX1P67809 OR51AB1P-201ENST00000429046 620 ntBASIC5.27□□□□□ -1.57
YBX1P67809 GPM6BP2-201ENST00000432046 144 ntBASIC5.27□□□□□ -1.57
YBX1P67809 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC5.27□□□□□ -1.57
YBX1P67809 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
YBX1P67809 AC024082.2-201ENST00000434771 238 ntBASIC5.27□□□□□ -1.57
YBX1P67809 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.27□□□□□ -1.57
YBX1P67809 GPM6BP1-201ENST00000446387 144 ntBASIC5.27□□□□□ -1.57
YBX1P67809 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.27□□□□□ -1.57
YBX1P67809 AC090602.1-201ENST00000469695 252 ntBASIC5.27□□□□□ -1.57
YBX1P67809 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms