Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AL132838.2-201ENST00000492041 314 ntBASIC3.52□□□□□ -1.85
LMO4P61968 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.52□□□□□ -1.85
LMO4P61968 FTH1P24-201ENST00000503502 462 ntBASIC3.52□□□□□ -1.85
LMO4P61968 PRELID3BP7-201ENST00000503606 469 ntBASIC3.52□□□□□ -1.85
LMO4P61968 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.52□□□□□ -1.85
LMO4P61968 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LMO4P61968 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.52□□□□□ -1.85
LMO4P61968 AC093755.1-201ENST00000512950 1023 ntBASIC3.52□□□□□ -1.85
LMO4P61968 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.52□□□□□ -1.85
LMO4P61968 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.52□□□□□ -1.85
LMO4P61968 AC022790.1-201ENST00000522872 204 ntBASIC3.52□□□□□ -1.85
LMO4P61968 AC134698.4-201ENST00000523451 826 ntBASIC3.52□□□□□ -1.85
LMO4P61968 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.52□□□□□ -1.85
LMO4P61968 MTCO3P15-201ENST00000526563 574 ntBASIC3.52□□□□□ -1.85
LMO4P61968 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.52□□□□□ -1.85
LMO4P61968 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.52□□□□□ -1.85
LMO4P61968 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC3.52□□□□□ -1.85
LMO4P61968 AC006064.5-201ENST00000541782 248 ntBASIC3.52□□□□□ -1.85
LMO4P61968 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.52□□□□□ -1.85
LMO4P61968 ELOCP32-201ENST00000548625 324 ntBASIC3.52□□□□□ -1.85
LMO4P61968 AC010198.2-201ENST00000550612 259 ntBASIC3.52□□□□□ -1.85
LMO4P61968 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.52□□□□□ -1.85
LMO4P61968 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.52□□□□□ -1.85
LMO4P61968 AADACP1-206ENST00000561502 1193 ntBASIC3.52□□□□□ -1.85
LMO4P61968 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.52□□□□□ -1.85
LMO4P61968 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.52□□□□□ -1.85
LMO4P61968 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.52□□□□□ -1.85
LMO4P61968 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.52□□□□□ -1.85
LMO4P61968 AC090616.2-202ENST00000584248 222 ntBASIC3.52□□□□□ -1.85
LMO4P61968 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.52□□□□□ -1.85
LMO4P61968 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC3.52□□□□□ -1.85
LMO4P61968 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LMO4P61968 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.52□□□□□ -1.85
LMO4P61968 AL031985.2-201ENST00000600955 480 ntBASIC3.52□□□□□ -1.85
LMO4P61968 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LMO4P61968 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.52□□□□□ -1.85
LMO4P61968 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.52□□□□□ -1.85
LMO4P61968 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.52□□□□□ -1.85
LMO4P61968 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.52□□□□□ -1.85
LMO4P61968 AC008013.2-202ENST00000637965 364 ntBASIC3.52□□□□□ -1.85
LMO4P61968 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.52□□□□□ -1.85
LMO4P61968 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LMO4P61968 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.52□□□□□ -1.85
LMO4P61968 AL592437.2-201ENST00000421655 2434 ntBASIC3.52□□□□□ -1.85
LMO4P61968 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LMO4P61968 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.52□□□□□ -1.85
LMO4P61968 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC3.52□□□□□ -1.85
LMO4P61968 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LMO4P61968 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LMO4P61968 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LMO4P61968 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
LMO4P61968 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
LMO4P61968 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LMO4P61968 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LMO4P61968 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC3.51□□□□□ -1.85
LMO4P61968 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LMO4P61968 AC119744.1-201ENST00000454746 1715 ntBASIC3.51□□□□□ -1.85
LMO4P61968 EOGT-210ENST00000615922 1931 ntBASIC3.51□□□□□ -1.85
LMO4P61968 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.51□□□□□ -1.85
LMO4P61968 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LMO4P61968 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
LMO4P61968 RNA5SP130-201ENST00000364431 114 ntBASIC3.51□□□□□ -1.85
LMO4P61968 RNA5SP283-201ENST00000365604 119 ntBASIC3.51□□□□□ -1.85
LMO4P61968 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.51□□□□□ -1.85
LMO4P61968 DNAJC19P6-201ENST00000401853 280 ntBASIC3.51□□□□□ -1.85
LMO4P61968 RNU6-628P-201ENST00000410675 107 ntBASIC3.51□□□□□ -1.85
LMO4P61968 MIR1911-201ENST00000410783 80 ntBASIC3.51□□□□□ -1.85
LMO4P61968 AC108032.1-201ENST00000416706 207 ntBASIC3.51□□□□□ -1.85
LMO4P61968 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.51□□□□□ -1.85
LMO4P61968 OR5AW1P-201ENST00000426334 1006 ntBASIC3.51□□□□□ -1.85
LMO4P61968 AL117339.2-201ENST00000430475 180 ntBASIC3.51□□□□□ -1.85
LMO4P61968 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.51□□□□□ -1.85
LMO4P61968 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.51□□□□□ -1.85
LMO4P61968 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.51□□□□□ -1.85
LMO4P61968 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.51□□□□□ -1.85
LMO4P61968 HMGB3P9-201ENST00000441799 583 ntBASIC3.51□□□□□ -1.85
LMO4P61968 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.51□□□□□ -1.85
LMO4P61968 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.51□□□□□ -1.85
LMO4P61968 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.51□□□□□ -1.85
LMO4P61968 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.51□□□□□ -1.85
LMO4P61968 RNA5SP246-201ENST00000458909 119 ntBASIC3.51□□□□□ -1.85
LMO4P61968 RNU7-140P-201ENST00000459546 60 ntBASIC3.51□□□□□ -1.85
LMO4P61968 SYPL1P1-201ENST00000473622 768 ntBASIC3.51□□□□□ -1.85
LMO4P61968 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.51□□□□□ -1.85
LMO4P61968 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.51□□□□□ -1.85
LMO4P61968 AC108064.1-201ENST00000513791 460 ntBASIC3.51□□□□□ -1.85
LMO4P61968 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.51□□□□□ -1.85
LMO4P61968 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.51□□□□□ -1.85
LMO4P61968 AC105185.1-201ENST00000518705 535 ntBASIC3.51□□□□□ -1.85
LMO4P61968 AC134698.5-201ENST00000519444 336 ntBASIC3.51□□□□□ -1.85
LMO4P61968 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.51□□□□□ -1.85
LMO4P61968 AC022880.1-201ENST00000534017 973 ntBASIC3.51□□□□□ -1.85
LMO4P61968 CYCSP28-201ENST00000534284 321 ntBASIC3.51□□□□□ -1.85
LMO4P61968 AC068993.1-201ENST00000546724 589 ntBASIC3.51□□□□□ -1.85
LMO4P61968 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.51□□□□□ -1.85
LMO4P61968 NBEAP1-201ENST00000554452 979 ntBASIC3.51□□□□□ -1.85
LMO4P61968 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LMO4P61968 DUXAP1-201ENST00000556632 463 ntBASIC3.51□□□□□ -1.85
LMO4P61968 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.51□□□□□ -1.85
LMO4P61968 AC095057.3-201ENST00000567102 1157 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms