Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PER3P56645 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PER3P56645 RNU5A-6P-201ENST00000384136 116 ntBASIC4.85□□□□□ -1.63
PER3P56645 RNU6-533P-201ENST00000384144 107 ntBASIC4.85□□□□□ -1.63
PER3P56645 RNA5SP241-201ENST00000391326 114 ntBASIC4.85□□□□□ -1.63
PER3P56645 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.85□□□□□ -1.63
PER3P56645 RNU2-21P-201ENST00000410368 188 ntBASIC4.85□□□□□ -1.63
PER3P56645 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.85□□□□□ -1.63
PER3P56645 AC096632.1-201ENST00000427395 310 ntBASIC4.85□□□□□ -1.63
PER3P56645 BX890604.2-201ENST00000427883 474 ntBASIC4.85□□□□□ -1.63
PER3P56645 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.85□□□□□ -1.63
PER3P56645 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.85□□□□□ -1.63
PER3P56645 RPL12P17-201ENST00000432393 498 ntBASIC4.85□□□□□ -1.63
PER3P56645 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.85□□□□□ -1.63
PER3P56645 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.85□□□□□ -1.63
PER3P56645 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.85□□□□□ -1.63
PER3P56645 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.85□□□□□ -1.63
PER3P56645 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.85□□□□□ -1.63
PER3P56645 LINC02210-201ENST00000444561 288 ntBASIC4.85□□□□□ -1.63
PER3P56645 PAXBP1P1-201ENST00000449315 447 ntBASIC4.85□□□□□ -1.63
PER3P56645 AL591623.2-201ENST00000449978 222 ntBASIC4.85□□□□□ -1.63
PER3P56645 AC003071.1-201ENST00000451219 789 ntBASIC4.85□□□□□ -1.63
PER3P56645 BX322784.1-201ENST00000455793 1077 ntBASIC4.85□□□□□ -1.63
PER3P56645 RN7SL188P-201ENST00000469842 285 ntBASIC4.85□□□□□ -1.63
PER3P56645 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
PER3P56645 RN7SL481P-201ENST00000477764 299 ntBASIC4.85□□□□□ -1.63
PER3P56645 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.85□□□□□ -1.63
PER3P56645 RPL9P6-201ENST00000492764 598 ntBASIC4.85□□□□□ -1.63
PER3P56645 AC090453.1-201ENST00000495560 436 ntBASIC4.85□□□□□ -1.63
PER3P56645 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.85□□□□□ -1.63
PER3P56645 AC034159.1-201ENST00000513885 583 ntBASIC4.85□□□□□ -1.63
PER3P56645 RNU6-941P-201ENST00000516346 108 ntBASIC4.85□□□□□ -1.63
PER3P56645 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.85□□□□□ -1.63
PER3P56645 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
PER3P56645 COX6CP8-201ENST00000522620 226 ntBASIC4.85□□□□□ -1.63
PER3P56645 OR5AP1P-201ENST00000529730 940 ntBASIC4.85□□□□□ -1.63
PER3P56645 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.85□□□□□ -1.63
PER3P56645 AC063949.1-201ENST00000552900 865 ntBASIC4.85□□□□□ -1.63
PER3P56645 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.85□□□□□ -1.63
PER3P56645 AC040958.1-201ENST00000561102 201 ntBASIC4.85□□□□□ -1.63
PER3P56645 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PER3P56645 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.85□□□□□ -1.63
PER3P56645 AC109347.2-201ENST00000610220 349 ntBASIC4.85□□□□□ -1.63
PER3P56645 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.85□□□□□ -1.63
PER3P56645 AC068722.2-201ENST00000618734 544 ntBASIC4.85□□□□□ -1.63
PER3P56645 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.85□□□□□ -1.63
PER3P56645 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.85□□□□□ -1.63
PER3P56645 AC091905.4-201ENST00000623432 202 ntBASIC4.85□□□□□ -1.63
PER3P56645 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.85□□□□□ -1.63
PER3P56645 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.85□□□□□ -1.63
PER3P56645 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.85□□□□□ -1.63
PER3P56645 AC099654.13-201ENST00000639774 207 ntBASIC4.85□□□□□ -1.63
PER3P56645 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PER3P56645 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PER3P56645 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PER3P56645 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.85□□□□□ -1.63
PER3P56645 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PER3P56645 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PER3P56645 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PER3P56645 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
PER3P56645 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.85□□□□□ -1.63
PER3P56645 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PER3P56645 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PER3P56645 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PER3P56645 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
PER3P56645 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
PER3P56645 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PER3P56645 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.84□□□□□ -1.63
PER3P56645 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
PER3P56645 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PER3P56645 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
PER3P56645 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PER3P56645 Y_RNA.554-201ENST00000384672 102 ntBASIC4.84□□□□□ -1.63
PER3P56645 AC013442.1-201ENST00000397347 228 ntBASIC4.84□□□□□ -1.63
PER3P56645 RPL31P52-201ENST00000407532 367 ntBASIC4.84□□□□□ -1.63
PER3P56645 RPS3AP3-201ENST00000411933 242 ntBASIC4.84□□□□□ -1.63
PER3P56645 RPSAP35-201ENST00000413753 818 ntBASIC4.84□□□□□ -1.63
PER3P56645 RPL26P29-201ENST00000415623 438 ntBASIC4.84□□□□□ -1.63
PER3P56645 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.84□□□□□ -1.63
PER3P56645 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.84□□□□□ -1.63
PER3P56645 RAD23BP1-201ENST00000421404 1227 ntBASIC4.84□□□□□ -1.63
PER3P56645 AC007161.1-204ENST00000423039 460 ntBASIC4.84□□□□□ -1.63
PER3P56645 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.84□□□□□ -1.63
PER3P56645 AL139415.2-201ENST00000431968 163 ntBASIC4.84□□□□□ -1.63
PER3P56645 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.84□□□□□ -1.63
PER3P56645 NDUFB4P8-201ENST00000435351 367 ntBASIC4.84□□□□□ -1.63
PER3P56645 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.84□□□□□ -1.63
PER3P56645 UBE2V1P8-201ENST00000437166 265 ntBASIC4.84□□□□□ -1.63
PER3P56645 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PER3P56645 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.84□□□□□ -1.63
PER3P56645 TRBV26-201ENST00000456572 344 ntBASIC4.84□□□□□ -1.63
PER3P56645 MTCO1P42-201ENST00000457379 726 ntBASIC4.84□□□□□ -1.63
PER3P56645 snoU13.7-201ENST00000459220 104 ntBASIC4.84□□□□□ -1.63
PER3P56645 snoU109.1-201ENST00000459339 135 ntBASIC4.84□□□□□ -1.63
PER3P56645 SNORD125-201ENST00000459538 96 ntBASIC4.84□□□□□ -1.63
PER3P56645 AC092324.1-201ENST00000468671 324 ntBASIC4.84□□□□□ -1.63
PER3P56645 OR52A4P-201ENST00000472867 958 ntBASIC4.84□□□□□ -1.63
PER3P56645 AL136126.1-201ENST00000473603 402 ntBASIC4.84□□□□□ -1.63
PER3P56645 HMGB1P36-201ENST00000487709 576 ntBASIC4.84□□□□□ -1.63
PER3P56645 RPL7P24-201ENST00000493052 752 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms