Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.91□□□□□ -1.78
CDH11P55287 AL161631.1-201ENST00000417933 486 ntBASIC3.91□□□□□ -1.78
CDH11P55287 MRPS36P1-201ENST00000421291 307 ntBASIC3.91□□□□□ -1.78
CDH11P55287 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH11P55287 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH11P55287 AL031736.2-201ENST00000426573 787 ntBASIC3.91□□□□□ -1.78
CDH11P55287 USP9YP31-201ENST00000431405 881 ntBASIC3.91□□□□□ -1.78
CDH11P55287 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH11P55287 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH11P55287 RPL23AP15-201ENST00000450202 459 ntBASIC3.91□□□□□ -1.78
CDH11P55287 Z99714.1-201ENST00000450463 807 ntBASIC3.91□□□□□ -1.78
CDH11P55287 AC239809.1-201ENST00000450470 217 ntBASIC3.91□□□□□ -1.78
CDH11P55287 EIF4A1P11-201ENST00000451239 222 ntBASIC3.91□□□□□ -1.78
CDH11P55287 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH11P55287 RPL21P134-201ENST00000453468 483 ntBASIC3.91□□□□□ -1.78
CDH11P55287 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH11P55287 AC108734.3-201ENST00000481241 1165 ntBASIC3.91□□□□□ -1.78
CDH11P55287 RN7SL812P-201ENST00000493791 279 ntBASIC3.91□□□□□ -1.78
CDH11P55287 RNU6-202P-201ENST00000515998 96 ntBASIC3.91□□□□□ -1.78
CDH11P55287 RNU6-1225P-201ENST00000516336 65 ntBASIC3.91□□□□□ -1.78
CDH11P55287 IGLVIV-53-201ENST00000520107 367 ntBASIC3.91□□□□□ -1.78
CDH11P55287 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH11P55287 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.91□□□□□ -1.78
CDH11P55287 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDH11P55287 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CDH11P55287 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH11P55287 AC005832.3-201ENST00000537929 631 ntBASIC3.91□□□□□ -1.78
CDH11P55287 TOMM20P2-201ENST00000540082 421 ntBASIC3.91□□□□□ -1.78
CDH11P55287 AC010198.2-201ENST00000550612 259 ntBASIC3.91□□□□□ -1.78
CDH11P55287 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.91□□□□□ -1.78
CDH11P55287 AL354943.1-201ENST00000572103 781 ntBASIC3.91□□□□□ -1.78
CDH11P55287 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.91□□□□□ -1.78
CDH11P55287 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.91□□□□□ -1.78
CDH11P55287 AL353778.1-201ENST00000603149 408 ntBASIC3.91□□□□□ -1.78
CDH11P55287 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH11P55287 AC097478.2-201ENST00000610572 514 ntBASIC3.91□□□□□ -1.78
CDH11P55287 TUSC7.1-201ENST00000610969 165 ntBASIC3.91□□□□□ -1.78
CDH11P55287 AC009318.3-201ENST00000616916 503 ntBASIC3.91□□□□□ -1.78
CDH11P55287 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.91□□□□□ -1.78
CDH11P55287 MIR4278-201ENST00000636094 69 ntBASIC3.91□□□□□ -1.78
CDH11P55287 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CDH11P55287 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDH11P55287 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.91□□□□□ -1.78
CDH11P55287 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDH11P55287 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDH11P55287 OR11H5P-202ENST00000641612 1325 ntBASIC3.91□□□□□ -1.78
CDH11P55287 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.9□□□□□ -1.78
CDH11P55287 AP000776.1-201ENST00000530032 1663 ntBASIC3.9□□□□□ -1.78
CDH11P55287 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
CDH11P55287 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.9□□□□□ -1.78
CDH11P55287 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.9□□□□□ -1.78
CDH11P55287 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CDH11P55287 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.9□□□□□ -1.78
CDH11P55287 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.9□□□□□ -1.78
CDH11P55287 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CDH11P55287 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
CDH11P55287 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.9□□□□□ -1.78
CDH11P55287 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CDH11P55287 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CDH11P55287 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CDH11P55287 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.9□□□□□ -1.79
CDH11P55287 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CDH11P55287 HNRNPDP2-201ENST00000406475 478 ntBASIC3.9□□□□□ -1.79
CDH11P55287 AL133264.1-201ENST00000407157 562 ntBASIC3.9□□□□□ -1.79
CDH11P55287 NRBF2P2-201ENST00000413087 861 ntBASIC3.9□□□□□ -1.79
CDH11P55287 JKAMPP1-201ENST00000413804 919 ntBASIC3.9□□□□□ -1.79
CDH11P55287 BOLA3P4-201ENST00000418151 400 ntBASIC3.9□□□□□ -1.79
CDH11P55287 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.9□□□□□ -1.79
CDH11P55287 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH11P55287 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH11P55287 AC010881.1-201ENST00000433830 235 ntBASIC3.9□□□□□ -1.79
CDH11P55287 YWHAZP8-201ENST00000436935 731 ntBASIC3.9□□□□□ -1.79
CDH11P55287 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.9□□□□□ -1.79
CDH11P55287 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.9□□□□□ -1.79
CDH11P55287 AC114495.1-201ENST00000441274 436 ntBASIC3.9□□□□□ -1.79
CDH11P55287 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.9□□□□□ -1.79
CDH11P55287 AL451050.1-201ENST00000450126 415 ntBASIC3.9□□□□□ -1.79
CDH11P55287 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH11P55287 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.9□□□□□ -1.79
CDH11P55287 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.9□□□□□ -1.79
CDH11P55287 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH11P55287 ACTG1P13-201ENST00000486987 1043 ntBASIC3.9□□□□□ -1.79
CDH11P55287 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.9□□□□□ -1.79
CDH11P55287 AC139783.2-201ENST00000504847 1145 ntBASIC3.9□□□□□ -1.79
CDH11P55287 AC025674.1-201ENST00000507074 324 ntBASIC3.9□□□□□ -1.79
CDH11P55287 ATP1B1P1-201ENST00000509767 915 ntBASIC3.9□□□□□ -1.79
CDH11P55287 AC079395.1-201ENST00000510981 262 ntBASIC3.9□□□□□ -1.79
CDH11P55287 AP001207.1-201ENST00000524051 481 ntBASIC3.9□□□□□ -1.79
CDH11P55287 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH11P55287 AC136624.4-201ENST00000573044 370 ntBASIC3.9□□□□□ -1.79
CDH11P55287 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CDH11P55287 NF1P5-201ENST00000588287 448 ntBASIC3.9□□□□□ -1.79
CDH11P55287 AC068790.5-201ENST00000602741 355 ntBASIC3.9□□□□□ -1.79
CDH11P55287 DUXAP3-201ENST00000603616 594 ntBASIC3.9□□□□□ -1.79
CDH11P55287 AC069304.3-201ENST00000603938 1084 ntBASIC3.9□□□□□ -1.79
CDH11P55287 AL451074.6-201ENST00000608512 729 ntBASIC3.9□□□□□ -1.79
CDH11P55287 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CDH11P55287 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.9□□□□□ -1.79
CDH11P55287 MIR6891-201ENST00000618788 93 ntBASIC3.9□□□□□ -1.79
CDH11P55287 MIR6715B-201ENST00000637172 77 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms