Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 DBIP2-201ENST00000419076 262 ntBASIC3.67□□□□□ -1.82
CDH6P55285 OSTCP5-201ENST00000425293 453 ntBASIC3.67□□□□□ -1.82
CDH6P55285 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.67□□□□□ -1.82
CDH6P55285 ARF4P2-201ENST00000430209 526 ntBASIC3.67□□□□□ -1.82
CDH6P55285 AL158071.1-201ENST00000430315 461 ntBASIC3.67□□□□□ -1.82
CDH6P55285 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH6P55285 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH6P55285 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.67□□□□□ -1.82
CDH6P55285 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH6P55285 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH6P55285 RN7SL594P-201ENST00000470590 287 ntBASIC3.67□□□□□ -1.82
CDH6P55285 AC023598.1-201ENST00000472521 361 ntBASIC3.67□□□□□ -1.82
CDH6P55285 TRBV8-2-201ENST00000475637 270 ntBASIC3.67□□□□□ -1.82
CDH6P55285 ACTG1P13-201ENST00000486987 1043 ntBASIC3.67□□□□□ -1.82
CDH6P55285 PTGES3P3-201ENST00000511479 482 ntBASIC3.67□□□□□ -1.82
CDH6P55285 AC008494.2-201ENST00000514544 370 ntBASIC3.67□□□□□ -1.82
CDH6P55285 RN7SKP18-201ENST00000516005 275 ntBASIC3.67□□□□□ -1.82
CDH6P55285 RNU1-45P-201ENST00000517191 141 ntBASIC3.67□□□□□ -1.82
CDH6P55285 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH6P55285 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH6P55285 MTCO1P49-201ENST00000523429 802 ntBASIC3.67□□□□□ -1.82
CDH6P55285 AC026333.2-201ENST00000542164 106 ntBASIC3.67□□□□□ -1.82
CDH6P55285 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.67□□□□□ -1.82
CDH6P55285 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.67□□□□□ -1.82
CDH6P55285 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH6P55285 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.67□□□□□ -1.82
CDH6P55285 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.67□□□□□ -1.82
CDH6P55285 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.67□□□□□ -1.82
CDH6P55285 AC006270.2-201ENST00000578523 652 ntBASIC3.67□□□□□ -1.82
CDH6P55285 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.67□□□□□ -1.82
CDH6P55285 AC112503.1-201ENST00000608436 391 ntBASIC3.67□□□□□ -1.82
CDH6P55285 U4.6-201ENST00000621618 127 ntBASIC3.67□□□□□ -1.82
CDH6P55285 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH6P55285 OTUD4P1-201ENST00000237841 3067 ntBASIC3.67□□□□□ -1.82
CDH6P55285 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDH6P55285 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDH6P55285 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDH6P55285 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.67□□□□□ -1.82
CDH6P55285 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDH6P55285 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDH6P55285 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDH6P55285 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDH6P55285 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDH6P55285 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDH6P55285 FRG1CP-201ENST00000358464 769 ntBASIC3.66□□□□□ -1.82
CDH6P55285 SNORD51.1-201ENST00000365405 77 ntBASIC3.66□□□□□ -1.82
CDH6P55285 OR52E6-202ENST00000379946 954 ntBASIC3.66□□□□□ -1.82
CDH6P55285 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
CDH6P55285 AC025750.1-201ENST00000399891 379 ntBASIC3.66□□□□□ -1.82
CDH6P55285 RNU2-21P-201ENST00000410368 188 ntBASIC3.66□□□□□ -1.82
CDH6P55285 RNU2-37P-201ENST00000410695 177 ntBASIC3.66□□□□□ -1.82
CDH6P55285 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH6P55285 RPL30P2-201ENST00000414021 291 ntBASIC3.66□□□□□ -1.82
CDH6P55285 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH6P55285 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH6P55285 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH6P55285 MTND4P24-201ENST00000424002 397 ntBASIC3.66□□□□□ -1.82
CDH6P55285 USP9YP31-201ENST00000431405 881 ntBASIC3.66□□□□□ -1.82
CDH6P55285 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.66□□□□□ -1.82
CDH6P55285 HMGB1P48-201ENST00000446155 598 ntBASIC3.66□□□□□ -1.82
CDH6P55285 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.66□□□□□ -1.82
CDH6P55285 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.66□□□□□ -1.82
CDH6P55285 AC093663.2-201ENST00000484625 313 ntBASIC3.66□□□□□ -1.82
CDH6P55285 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.66□□□□□ -1.82
CDH6P55285 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.66□□□□□ -1.82
CDH6P55285 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.66□□□□□ -1.82
CDH6P55285 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.66□□□□□ -1.82
CDH6P55285 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.66□□□□□ -1.82
CDH6P55285 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.66□□□□□ -1.82
CDH6P55285 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.66□□□□□ -1.82
CDH6P55285 AC010591.1-201ENST00000603941 649 ntBASIC3.66□□□□□ -1.82
CDH6P55285 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.66□□□□□ -1.82
CDH6P55285 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDH6P55285 AC022079.2-201ENST00000619739 566 ntBASIC3.66□□□□□ -1.82
CDH6P55285 MIR4496-201ENST00000635896 61 ntBASIC3.66□□□□□ -1.82
CDH6P55285 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.66□□□□□ -1.82
CDH6P55285 FAM157B-203ENST00000639350 358 ntBASIC3.66□□□□□ -1.82
CDH6P55285 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CDH6P55285 RPS4XP5-202ENST00000449995 1334 ntBASIC3.66□□□□□ -1.82
CDH6P55285 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDH6P55285 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDH6P55285 ZNF285B-201ENST00000561698 1767 ntBASIC3.66□□□□□ -1.82
CDH6P55285 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.66□□□□□ -1.82
CDH6P55285 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDH6P55285 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CDH6P55285 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CDH6P55285 XPOTP1-201ENST00000443317 2398 ntBASIC3.65□□□□□ -1.83
CDH6P55285 AP001148.1-201ENST00000624124 2359 ntBASIC3.65□□□□□ -1.83
CDH6P55285 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.65□□□□□ -1.83
CDH6P55285 AC007390.1-201ENST00000415722 356 ntBASIC3.65□□□□□ -1.83
CDH6P55285 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.65□□□□□ -1.83
CDH6P55285 AC018644.1-201ENST00000429934 551 ntBASIC3.65□□□□□ -1.83
CDH6P55285 RPL37P1-201ENST00000432310 284 ntBASIC3.65□□□□□ -1.83
CDH6P55285 TRIM60P13-201ENST00000432350 1283 ntBASIC3.65□□□□□ -1.83
CDH6P55285 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH6P55285 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH6P55285 AL133547.1-201ENST00000448546 220 ntBASIC3.65□□□□□ -1.83
CDH6P55285 RPL29P29-201ENST00000448725 423 ntBASIC3.65□□□□□ -1.83
CDH6P55285 RN7SL542P-201ENST00000467147 294 ntBASIC3.65□□□□□ -1.83
CDH6P55285 AC078817.1-201ENST00000492623 435 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms