Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AC090948.2-201ENST00000607363 564 ntBASIC5.66□□□□□ -1.5
PMS1P54277 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PMS1P54277 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PMS1P54277 AC009268.2-201ENST00000621925 457 ntBASIC5.66□□□□□ -1.5
PMS1P54277 MIR1321-201ENST00000637766 79 ntBASIC5.66□□□□□ -1.5
PMS1P54277 AC074101.1-201ENST00000637861 241 ntBASIC5.66□□□□□ -1.5
PMS1P54277 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PMS1P54277 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PMS1P54277 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
PMS1P54277 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PMS1P54277 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.66□□□□□ -1.5
PMS1P54277 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.66□□□□□ -1.5
PMS1P54277 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.66□□□□□ -1.5
PMS1P54277 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PMS1P54277 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PMS1P54277 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.65□□□□□ -1.5
PMS1P54277 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.65□□□□□ -1.5
PMS1P54277 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
PMS1P54277 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.65□□□□□ -1.5
PMS1P54277 AC097504.1-201ENST00000515103 2415 ntBASIC5.65□□□□□ -1.5
PMS1P54277 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
PMS1P54277 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PMS1P54277 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PMS1P54277 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PMS1P54277 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PMS1P54277 RNU6-181P-201ENST00000363225 107 ntBASIC5.65□□□□□ -1.5
PMS1P54277 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
PMS1P54277 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PMS1P54277 RNU6-877P-201ENST00000383868 107 ntBASIC5.65□□□□□ -1.5
PMS1P54277 SNORA67-201ENST00000384423 137 ntBASIC5.65□□□□□ -1.5
PMS1P54277 MIR649-201ENST00000384843 97 ntBASIC5.65□□□□□ -1.5
PMS1P54277 RNU6-1009P-201ENST00000390996 107 ntBASIC5.65□□□□□ -1.5
PMS1P54277 U3.25-201ENST00000391209 220 ntBASIC5.65□□□□□ -1.5
PMS1P54277 EIF5P1-201ENST00000400019 1231 ntBASIC5.65□□□□□ -1.5
PMS1P54277 RPS20P2-201ENST00000402520 389 ntBASIC5.65□□□□□ -1.5
PMS1P54277 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.65□□□□□ -1.5
PMS1P54277 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.65□□□□□ -1.5
PMS1P54277 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.65□□□□□ -1.5
PMS1P54277 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC5.65□□□□□ -1.5
PMS1P54277 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.65□□□□□ -1.5
PMS1P54277 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.65□□□□□ -1.5
PMS1P54277 AC108075.1-201ENST00000424692 529 ntBASIC5.65□□□□□ -1.5
PMS1P54277 AC093655.2-201ENST00000425735 631 ntBASIC5.65□□□□□ -1.5
PMS1P54277 RPL31P35-201ENST00000431058 377 ntBASIC5.65□□□□□ -1.5
PMS1P54277 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.65□□□□□ -1.5
PMS1P54277 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.65□□□□□ -1.5
PMS1P54277 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.65□□□□□ -1.5
PMS1P54277 FHP1-201ENST00000442741 703 ntBASIC5.65□□□□□ -1.5
PMS1P54277 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC5.65□□□□□ -1.5
PMS1P54277 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.65□□□□□ -1.5
PMS1P54277 Z92846.1-201ENST00000456203 268 ntBASIC5.65□□□□□ -1.5
PMS1P54277 RPL31P50-201ENST00000471002 296 ntBASIC5.65□□□□□ -1.5
PMS1P54277 RPL7P51-201ENST00000490532 749 ntBASIC5.65□□□□□ -1.5
PMS1P54277 AC108693.1-201ENST00000496068 432 ntBASIC5.65□□□□□ -1.5
PMS1P54277 OR5M14P-201ENST00000506803 618 ntBASIC5.65□□□□□ -1.5
PMS1P54277 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.65□□□□□ -1.5
PMS1P54277 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC5.65□□□□□ -1.5
PMS1P54277 snoU109.6-201ENST00000516831 118 ntBASIC5.65□□□□□ -1.5
PMS1P54277 COX6CP8-201ENST00000522620 226 ntBASIC5.65□□□□□ -1.5
PMS1P54277 IGKV3D-34-201ENST00000522638 302 ntBASIC5.65□□□□□ -1.5
PMS1P54277 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.65□□□□□ -1.5
PMS1P54277 AC104383.1-201ENST00000530297 370 ntBASIC5.65□□□□□ -1.5
PMS1P54277 ZNF705CP-201ENST00000530515 889 ntBASIC5.65□□□□□ -1.5
PMS1P54277 LSM6P2-201ENST00000552208 177 ntBASIC5.65□□□□□ -1.5
PMS1P54277 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.65□□□□□ -1.5
PMS1P54277 AC025678.1-201ENST00000567861 338 ntBASIC5.65□□□□□ -1.5
PMS1P54277 AC034268.2-201ENST00000571784 482 ntBASIC5.65□□□□□ -1.5
PMS1P54277 LARP7P2-201ENST00000575306 125 ntBASIC5.65□□□□□ -1.5
PMS1P54277 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.65□□□□□ -1.5
PMS1P54277 AC011816.2-201ENST00000607089 556 ntBASIC5.65□□□□□ -1.5
PMS1P54277 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.65□□□□□ -1.5
PMS1P54277 AL161734.1-201ENST00000609720 557 ntBASIC5.65□□□□□ -1.5
PMS1P54277 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PMS1P54277 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC5.65□□□□□ -1.5
PMS1P54277 AC004009.2-201ENST00000623016 728 ntBASIC5.65□□□□□ -1.5
PMS1P54277 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.65□□□□□ -1.5
PMS1P54277 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.65□□□□□ -1.5
PMS1P54277 AC011493.1-201ENST00000596753 1632 ntBASIC5.65□□□□□ -1.51
PMS1P54277 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PMS1P54277 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PMS1P54277 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.65□□□□□ -1.51
PMS1P54277 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
PMS1P54277 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.65□□□□□ -1.51
PMS1P54277 CASC19-221ENST00000641309 1382 ntBASIC5.65□□□□□ -1.51
PMS1P54277 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PMS1P54277 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PMS1P54277 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
PMS1P54277 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
PMS1P54277 AC131971.1-201ENST00000332881 1482 ntBASIC5.64□□□□□ -1.51
PMS1P54277 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PMS1P54277 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PMS1P54277 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PMS1P54277 CCT4P2-201ENST00000233836 1548 ntBASIC5.64□□□□□ -1.51
PMS1P54277 AC009313.2-201ENST00000417893 1941 ntBASIC5.64□□□□□ -1.51
PMS1P54277 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PMS1P54277 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.64□□□□□ -1.51
PMS1P54277 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PMS1P54277 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PMS1P54277 AL023807.1-201ENST00000407932 359 ntBASIC5.64□□□□□ -1.51
PMS1P54277 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms