Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC012158.1-204ENST00000483430 465 ntBASIC4.23□□□□□ -1.73
CLCNKAP51800 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.23□□□□□ -1.73
CLCNKAP51800 AC008885.2-201ENST00000509506 930 ntBASIC4.23□□□□□ -1.73
CLCNKAP51800 AC048346.1-201ENST00000510247 144 ntBASIC4.23□□□□□ -1.73
CLCNKAP51800 PARP4P3-201ENST00000510265 317 ntBASIC4.23□□□□□ -1.73
CLCNKAP51800 OR5H4P-201ENST00000510851 923 ntBASIC4.23□□□□□ -1.73
CLCNKAP51800 AC116353.3-201ENST00000511215 249 ntBASIC4.23□□□□□ -1.73
CLCNKAP51800 RNU6-885P-201ENST00000516607 104 ntBASIC4.23□□□□□ -1.73
CLCNKAP51800 AF279873.1-201ENST00000523393 313 ntBASIC4.23□□□□□ -1.73
CLCNKAP51800 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLCNKAP51800 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.23□□□□□ -1.73
CLCNKAP51800 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.23□□□□□ -1.73
CLCNKAP51800 AC013444.2-201ENST00000603317 787 ntBASIC4.23□□□□□ -1.73
CLCNKAP51800 AC114878.2-201ENST00000604863 1251 ntBASIC4.23□□□□□ -1.73
CLCNKAP51800 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.23□□□□□ -1.73
CLCNKAP51800 AL450489.1-201ENST00000612071 468 ntBASIC4.23□□□□□ -1.73
CLCNKAP51800 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.23□□□□□ -1.73
CLCNKAP51800 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.23□□□□□ -1.73
CLCNKAP51800 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLCNKAP51800 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLCNKAP51800 AC022031.1-201ENST00000585985 2593 ntBASIC4.23□□□□□ -1.73
CLCNKAP51800 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLCNKAP51800 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CLCNKAP51800 Z99496.1-201ENST00000469424 1477 ntBASIC4.23□□□□□ -1.73
CLCNKAP51800 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.23□□□□□ -1.73
CLCNKAP51800 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLCNKAP51800 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.23□□□□□ -1.73
CLCNKAP51800 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.22□□□□□ -1.73
CLCNKAP51800 AC109315.1-201ENST00000584143 1347 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.22□□□□□ -1.73
CLCNKAP51800 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLCNKAP51800 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLCNKAP51800 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLCNKAP51800 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.22□□□□□ -1.73
CLCNKAP51800 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLCNKAP51800 AL512646.1-201ENST00000269395 1077 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 RNU1-14P-201ENST00000362759 152 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.22□□□□□ -1.73
CLCNKAP51800 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLCNKAP51800 RNU6-157P-201ENST00000383957 107 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 AL161909.1-201ENST00000397390 712 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 RSL24D1P4-201ENST00000400938 484 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 RNA5SP239-201ENST00000410218 129 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 MIR1911-201ENST00000410783 80 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.22□□□□□ -1.73
CLCNKAP51800 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.22□□□□□ -1.73
CLCNKAP51800 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.22□□□□□ -1.73
CLCNKAP51800 AC006960.1-201ENST00000419980 153 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.22□□□□□ -1.73
CLCNKAP51800 MRPS36P1-201ENST00000421291 307 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLCNKAP51800 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.22□□□□□ -1.73
CLCNKAP51800 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.22□□□□□ -1.73
CLCNKAP51800 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 RPS6P12-201ENST00000432491 726 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 ATP5F1P1-201ENST00000433775 569 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 SETP8-201ENST00000435341 628 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.22□□□□□ -1.73
CLCNKAP51800 NUTF2P3-201ENST00000448540 384 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.22□□□□□ -1.73
CLCNKAP51800 RPL21P134-201ENST00000453468 483 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 AL121877.1-201ENST00000453704 622 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 AC133473.1-201ENST00000455173 299 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 VPS26AP1-201ENST00000483197 979 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 AC105137.1-201ENST00000484355 562 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 RPL30P11-201ENST00000495304 339 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 AC021146.8-201ENST00000507455 733 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLCNKAP51800 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.22□□□□□ -1.73
CLCNKAP51800 RNU6-1129P-201ENST00000515964 104 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 RNA5SP49-201ENST00000516450 115 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 AC087808.1-201ENST00000520501 361 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.22□□□□□ -1.73
CLCNKAP51800 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.22□□□□□ -1.73
CLCNKAP51800 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.22□□□□□ -1.73
CLCNKAP51800 HIGD1AP17-201ENST00000554576 276 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 DUXAP1-201ENST00000556632 463 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 TVP23BP1-201ENST00000557500 617 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 AC087465.1-201ENST00000560574 245 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLCNKAP51800 AC083899.3-201ENST00000603413 594 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 AC091488.1-201ENST00000604239 660 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 DPRXP5-201ENST00000604662 539 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.22□□□□□ -1.73
CLCNKAP51800 AL360219.1-201ENST00000610230 366 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.22□□□□□ -1.73
CLCNKAP51800 AC007546.1-201ENST00000619452 559 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 MIR8059-201ENST00000620427 81 ntBASIC4.22□□□□□ -1.73
CLCNKAP51800 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CLCNKAP51800 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CLCNKAP51800 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.22□□□□□ -1.73
CLCNKAP51800 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CLCNKAP51800 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
CLCNKAP51800 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
CLCNKAP51800 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLCNKAP51800 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.22□□□□□ -1.73
CLCNKAP51800 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLCNKAP51800 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.22□□□□□ -1.73
CLCNKAP51800 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms