Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
BRCA2P51587 UQCRHP3-201ENST00000451503 251 ntBASIC3.21□□□□□ -1.9
BRCA2P51587 BTF3L4P4-201ENST00000506381 449 ntBASIC3.21□□□□□ -1.9
BRCA2P51587 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.21□□□□□ -1.9
BRCA2P51587 AC009948.4-201ENST00000604692 675 ntBASIC3.21□□□□□ -1.9
BRCA2P51587 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.21□□□□□ -1.9
BRCA2P51587 JKAMPP1-201ENST00000413804 919 ntBASIC3.21□□□□□ -1.9
BRCA2P51587 USP12PY-201ENST00000427677 1064 ntBASIC3.21□□□□□ -1.9
BRCA2P51587 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.21□□□□□ -1.9
BRCA2P51587 AL442163.2-201ENST00000553912 710 ntBASIC3.21□□□□□ -1.9
BRCA2P51587 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.21□□□□□ -1.9
BRCA2P51587 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.21□□□□□ -1.9
BRCA2P51587 MIR486-1-201ENST00000612171 68 ntBASIC3.21□□□□□ -1.9
BRCA2P51587 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
BRCA2P51587 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
BRCA2P51587 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC3.2□□□□□ -1.9
BRCA2P51587 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
BRCA2P51587 MRPS18BP2-201ENST00000434310 759 ntBASIC3.2□□□□□ -1.9
BRCA2P51587 NIPA2P5-201ENST00000452282 464 ntBASIC3.2□□□□□ -1.9
BRCA2P51587 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.2□□□□□ -1.9
BRCA2P51587 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.2□□□□□ -1.9
BRCA2P51587 AC007954.1-201ENST00000554198 494 ntBASIC3.2□□□□□ -1.9
BRCA2P51587 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
BRCA2P51587 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
BRCA2P51587 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.2□□□□□ -1.9
BRCA2P51587 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
BRCA2P51587 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
BRCA2P51587 AC090525.1-201ENST00000479116 478 ntBASIC3.2□□□□□ -1.9
BRCA2P51587 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.2□□□□□ -1.9
BRCA2P51587 SNORA70.19-201ENST00000516717 90 ntBASIC3.2□□□□□ -1.9
BRCA2P51587 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.2□□□□□ -1.9
BRCA2P51587 AC010680.4-201ENST00000605334 543 ntBASIC3.2□□□□□ -1.9
BRCA2P51587 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.2□□□□□ -1.9
BRCA2P51587 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
BRCA2P51587 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC3.2□□□□□ -1.9
BRCA2P51587 RPL7P26-201ENST00000333817 754 ntBASIC3.19□□□□□ -1.9
BRCA2P51587 RN7SKP283-201ENST00000517197 270 ntBASIC3.19□□□□□ -1.9
BRCA2P51587 AC009163.5-201ENST00000575421 637 ntBASIC3.19□□□□□ -1.9
BRCA2P51587 uc_338.32-201ENST00000615087 172 ntBASIC3.19□□□□□ -1.9
BRCA2P51587 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC3.19□□□□□ -1.9
BRCA2P51587 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
BRCA2P51587 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
BRCA2P51587 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
BRCA2P51587 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
BRCA2P51587 MIR513A2-201ENST00000385249 127 ntBASIC3.19□□□□□ -1.9
BRCA2P51587 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.19□□□□□ -1.9
BRCA2P51587 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.19□□□□□ -1.9
BRCA2P51587 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.19□□□□□ -1.9
BRCA2P51587 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.19□□□□□ -1.9
BRCA2P51587 AL365400.2-201ENST00000605604 902 ntBASIC3.19□□□□□ -1.9
BRCA2P51587 AC006020.1-201ENST00000420179 1854 ntBASIC3.19□□□□□ -1.9
BRCA2P51587 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
BRCA2P51587 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
BRCA2P51587 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
BRCA2P51587 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
BRCA2P51587 AL592045.1-201ENST00000429867 352 ntBASIC3.19□□□□□ -1.9
BRCA2P51587 HMGN2P23-201ENST00000456759 269 ntBASIC3.19□□□□□ -1.9
BRCA2P51587 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
BRCA2P51587 AL669942.2-201ENST00000620352 697 ntBASIC3.19□□□□□ -1.9
BRCA2P51587 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
BRCA2P51587 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
BRCA2P51587 AP006437.1-201ENST00000641440 3685 ntBASIC3.19□□□□□ -1.9
BRCA2P51587 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
BRCA2P51587 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.18□□□□□ -1.9
BRCA2P51587 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.18□□□□□ -1.9
BRCA2P51587 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
BRCA2P51587 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
BRCA2P51587 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.18□□□□□ -1.9
BRCA2P51587 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
BRCA2P51587 AC010300.1-201ENST00000600671 5134 ntBASIC3.18□□□□□ -1.9
BRCA2P51587 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
BRCA2P51587 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
BRCA2P51587 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.18□□□□□ -1.9
BRCA2P51587 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
BRCA2P51587 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.18□□□□□ -1.9
BRCA2P51587 RHOT1P2-201ENST00000366423 333 ntBASIC3.18□□□□□ -1.9
BRCA2P51587 ELOCP18-201ENST00000434209 337 ntBASIC3.18□□□□□ -1.9
BRCA2P51587 RPS26P15-201ENST00000488067 348 ntBASIC3.18□□□□□ -1.9
BRCA2P51587 AC117522.3-201ENST00000507974 584 ntBASIC3.18□□□□□ -1.9
BRCA2P51587 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.18□□□□□ -1.9
BRCA2P51587 OR7M1P-201ENST00000608946 533 ntBASIC3.18□□□□□ -1.9
BRCA2P51587 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.18□□□□□ -1.9
BRCA2P51587 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC3.18□□□□□ -1.9
BRCA2P51587 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
BRCA2P51587 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
BRCA2P51587 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
BRCA2P51587 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
BRCA2P51587 AL356057.3-201ENST00000402607 340 ntBASIC3.18□□□□□ -1.9
BRCA2P51587 AC006989.1-201ENST00000427212 131 ntBASIC3.18□□□□□ -1.9
BRCA2P51587 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.18□□□□□ -1.9
BRCA2P51587 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.18□□□□□ -1.9
BRCA2P51587 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
BRCA2P51587 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
BRCA2P51587 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
BRCA2P51587 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
BRCA2P51587 AL161781.1-201ENST00000354277 403 ntBASIC3.17□□□□□ -1.9
BRCA2P51587 RNVU1-3-201ENST00000364313 161 ntBASIC3.17□□□□□ -1.9
BRCA2P51587 AL139039.1-201ENST00000401900 692 ntBASIC3.17□□□□□ -1.9
BRCA2P51587 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.17□□□□□ -1.9
BRCA2P51587 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms