Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 RNU6-398P-201ENST00000384143 109 ntBASIC3.67□□□□□ -1.82
CDX1P47902 RNU6-1122P-201ENST00000384449 107 ntBASIC3.67□□□□□ -1.82
CDX1P47902 ARF4P3-201ENST00000397387 509 ntBASIC3.67□□□□□ -1.82
CDX1P47902 MIR1183-201ENST00000408856 89 ntBASIC3.67□□□□□ -1.82
CDX1P47902 RNA5SP56-201ENST00000410277 118 ntBASIC3.67□□□□□ -1.82
CDX1P47902 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.67□□□□□ -1.82
CDX1P47902 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.67□□□□□ -1.82
CDX1P47902 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.67□□□□□ -1.82
CDX1P47902 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.67□□□□□ -1.82
CDX1P47902 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.67□□□□□ -1.82
CDX1P47902 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.67□□□□□ -1.82
CDX1P47902 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.67□□□□□ -1.82
CDX1P47902 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDX1P47902 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.67□□□□□ -1.82
CDX1P47902 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.67□□□□□ -1.82
CDX1P47902 RPL36AP15-201ENST00000444514 266 ntBASIC3.67□□□□□ -1.82
CDX1P47902 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.67□□□□□ -1.82
CDX1P47902 HMGN2P21-201ENST00000447764 270 ntBASIC3.67□□□□□ -1.82
CDX1P47902 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.67□□□□□ -1.82
CDX1P47902 FABP3P2-201ENST00000453169 399 ntBASIC3.67□□□□□ -1.82
CDX1P47902 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.67□□□□□ -1.82
CDX1P47902 RPS29P33-201ENST00000456717 146 ntBASIC3.67□□□□□ -1.82
CDX1P47902 USP9YP25-201ENST00000457708 443 ntBASIC3.67□□□□□ -1.82
CDX1P47902 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.67□□□□□ -1.82
CDX1P47902 AC006463.2-201ENST00000473326 348 ntBASIC3.67□□□□□ -1.82
CDX1P47902 AC020898.1-201ENST00000474167 787 ntBASIC3.67□□□□□ -1.82
CDX1P47902 RPL23AP72-201ENST00000492447 435 ntBASIC3.67□□□□□ -1.82
CDX1P47902 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.67□□□□□ -1.82
CDX1P47902 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.67□□□□□ -1.82
CDX1P47902 HMGB1P28-201ENST00000507778 552 ntBASIC3.67□□□□□ -1.82
CDX1P47902 AC116353.3-201ENST00000511215 249 ntBASIC3.67□□□□□ -1.82
CDX1P47902 AC026412.2-201ENST00000512270 1075 ntBASIC3.67□□□□□ -1.82
CDX1P47902 AC092593.2-201ENST00000513866 913 ntBASIC3.67□□□□□ -1.82
CDX1P47902 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.67□□□□□ -1.82
CDX1P47902 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.67□□□□□ -1.82
CDX1P47902 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.67□□□□□ -1.82
CDX1P47902 AL139174.1-201ENST00000531489 886 ntBASIC3.67□□□□□ -1.82
CDX1P47902 AC091515.1-201ENST00000548110 679 ntBASIC3.67□□□□□ -1.82
CDX1P47902 AC125611.1-201ENST00000549563 229 ntBASIC3.67□□□□□ -1.82
CDX1P47902 AC009101.1-201ENST00000568135 242 ntBASIC3.67□□□□□ -1.82
CDX1P47902 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC3.67□□□□□ -1.82
CDX1P47902 MIR4760-201ENST00000585040 80 ntBASIC3.67□□□□□ -1.82
CDX1P47902 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.67□□□□□ -1.82
CDX1P47902 AL669831.4-202ENST00000590817 238 ntBASIC3.67□□□□□ -1.82
CDX1P47902 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.67□□□□□ -1.82
CDX1P47902 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.67□□□□□ -1.82
CDX1P47902 AL031666.3-201ENST00000609320 1006 ntBASIC3.67□□□□□ -1.82
CDX1P47902 AC107075.1-201ENST00000613695 314 ntBASIC3.67□□□□□ -1.82
CDX1P47902 AC004943.3-201ENST00000624116 600 ntBASIC3.67□□□□□ -1.82
CDX1P47902 CYP3A51P-201ENST00000633513 256 ntBASIC3.67□□□□□ -1.82
CDX1P47902 DHX40P1-201ENST00000588725 1412 ntBASIC3.67□□□□□ -1.82
CDX1P47902 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDX1P47902 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.67□□□□□ -1.82
CDX1P47902 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDX1P47902 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.66□□□□□ -1.82
CDX1P47902 AC090337.1-201ENST00000579651 2074 ntBASIC3.66□□□□□ -1.82
CDX1P47902 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.66□□□□□ -1.82
CDX1P47902 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CDX1P47902 Y_RNA.192-201ENST00000363977 102 ntBASIC3.66□□□□□ -1.82
CDX1P47902 RNU6-730P-201ENST00000383954 104 ntBASIC3.66□□□□□ -1.82
CDX1P47902 SNORA70F-201ENST00000384142 135 ntBASIC3.66□□□□□ -1.82
CDX1P47902 RNU6-837P-201ENST00000391056 108 ntBASIC3.66□□□□□ -1.82
CDX1P47902 TAF9BP1-201ENST00000396646 746 ntBASIC3.66□□□□□ -1.82
CDX1P47902 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.66□□□□□ -1.82
CDX1P47902 RN7SKP106-201ENST00000410832 272 ntBASIC3.66□□□□□ -1.82
CDX1P47902 AC140479.3-201ENST00000418944 1126 ntBASIC3.66□□□□□ -1.82
CDX1P47902 FNDC3CP-201ENST00000420795 1155 ntBASIC3.66□□□□□ -1.82
CDX1P47902 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.66□□□□□ -1.82
CDX1P47902 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.66□□□□□ -1.82
CDX1P47902 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.66□□□□□ -1.82
CDX1P47902 CR769776.1-201ENST00000441254 787 ntBASIC3.66□□□□□ -1.82
CDX1P47902 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.66□□□□□ -1.82
CDX1P47902 EXTL2P1-201ENST00000446218 416 ntBASIC3.66□□□□□ -1.82
CDX1P47902 RPL39P6-201ENST00000448289 150 ntBASIC3.66□□□□□ -1.82
CDX1P47902 HMGB3P22-202ENST00000451823 572 ntBASIC3.66□□□□□ -1.82
CDX1P47902 NDUFA12P1-201ENST00000455914 406 ntBASIC3.66□□□□□ -1.82
CDX1P47902 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.66□□□□□ -1.82
CDX1P47902 RPS20P24-201ENST00000457473 361 ntBASIC3.66□□□□□ -1.82
CDX1P47902 MTND1P16-201ENST00000465177 898 ntBASIC3.66□□□□□ -1.82
CDX1P47902 AC025164.1-201ENST00000496249 478 ntBASIC3.66□□□□□ -1.82
CDX1P47902 AC108941.1-201ENST00000502853 530 ntBASIC3.66□□□□□ -1.82
CDX1P47902 AC020699.1-201ENST00000505161 445 ntBASIC3.66□□□□□ -1.82
CDX1P47902 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.66□□□□□ -1.82
CDX1P47902 AC109445.1-201ENST00000512356 383 ntBASIC3.66□□□□□ -1.82
CDX1P47902 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.66□□□□□ -1.82
CDX1P47902 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.66□□□□□ -1.82
CDX1P47902 AP001636.2-201ENST00000525517 696 ntBASIC3.66□□□□□ -1.82
CDX1P47902 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDX1P47902 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDX1P47902 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.66□□□□□ -1.82
CDX1P47902 HIGD1AP17-201ENST00000554576 276 ntBASIC3.66□□□□□ -1.82
CDX1P47902 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.66□□□□□ -1.82
CDX1P47902 AC022662.1-201ENST00000580252 331 ntBASIC3.66□□□□□ -1.82
CDX1P47902 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDX1P47902 AC069366.1-201ENST00000583159 838 ntBASIC3.66□□□□□ -1.82
CDX1P47902 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.66□□□□□ -1.82
CDX1P47902 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.66□□□□□ -1.82
CDX1P47902 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC3.66□□□□□ -1.82
CDX1P47902 AC092650.2-201ENST00000619984 902 ntBASIC3.66□□□□□ -1.82
CDX1P47902 U6.101-201ENST00000637707 76 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms