Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TNFRSF4P43489 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TNFRSF4P43489 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TNFRSF4P43489 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.86□□□□□ -1.79
TNFRSF4P43489 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TNFRSF4P43489 RNU6-202P-201ENST00000515998 96 ntBASIC3.86□□□□□ -1.79
TNFRSF4P43489 MTND2P26-201ENST00000528255 1029 ntBASIC3.86□□□□□ -1.79
TNFRSF4P43489 OR8I1P-201ENST00000529291 931 ntBASIC3.86□□□□□ -1.79
TNFRSF4P43489 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.86□□□□□ -1.79
TNFRSF4P43489 CYB5AP5-201ENST00000549779 389 ntBASIC3.86□□□□□ -1.79
TNFRSF4P43489 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.86□□□□□ -1.79
TNFRSF4P43489 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.86□□□□□ -1.79
TNFRSF4P43489 BPTFP1-201ENST00000579209 492 ntBASIC3.86□□□□□ -1.79
TNFRSF4P43489 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.86□□□□□ -1.79
TNFRSF4P43489 LLPHP1-201ENST00000603571 367 ntBASIC3.86□□□□□ -1.79
TNFRSF4P43489 AL139022.2-201ENST00000606934 443 ntBASIC3.86□□□□□ -1.79
TNFRSF4P43489 U3.45-201ENST00000607547 219 ntBASIC3.86□□□□□ -1.79
TNFRSF4P43489 AC013468.1-201ENST00000608680 598 ntBASIC3.86□□□□□ -1.79
TNFRSF4P43489 MIR4496-201ENST00000635896 61 ntBASIC3.86□□□□□ -1.79
TNFRSF4P43489 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TNFRSF4P43489 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TNFRSF4P43489 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TNFRSF4P43489 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TNFRSF4P43489 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TNFRSF4P43489 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.86□□□□□ -1.79
TNFRSF4P43489 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.86□□□□□ -1.79
TNFRSF4P43489 AC007390.2-201ENST00000606229 3803 ntBASIC3.86□□□□□ -1.79
TNFRSF4P43489 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TNFRSF4P43489 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TNFRSF4P43489 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TNFRSF4P43489 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC3.85□□□□□ -1.79
TNFRSF4P43489 AC083843.3-201ENST00000623679 2186 ntBASIC3.85□□□□□ -1.79
TNFRSF4P43489 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TNFRSF4P43489 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
TNFRSF4P43489 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
TNFRSF4P43489 AC234772.1-201ENST00000377927 937 ntBASIC3.85□□□□□ -1.79
TNFRSF4P43489 RNU6-761P-201ENST00000384148 107 ntBASIC3.85□□□□□ -1.79
TNFRSF4P43489 SNORA70E-201ENST00000384492 135 ntBASIC3.85□□□□□ -1.79
TNFRSF4P43489 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TNFRSF4P43489 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TNFRSF4P43489 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.85□□□□□ -1.79
TNFRSF4P43489 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.85□□□□□ -1.79
TNFRSF4P43489 AC013410.2-201ENST00000422627 201 ntBASIC3.85□□□□□ -1.79
TNFRSF4P43489 AC013262.1-201ENST00000426710 252 ntBASIC3.85□□□□□ -1.79
TNFRSF4P43489 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.85□□□□□ -1.79
TNFRSF4P43489 RPL23AP83-201ENST00000434984 473 ntBASIC3.85□□□□□ -1.79
TNFRSF4P43489 AC000041.1-201ENST00000439655 175 ntBASIC3.85□□□□□ -1.79
TNFRSF4P43489 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.85□□□□□ -1.79
TNFRSF4P43489 RPS3AP46-201ENST00000448352 682 ntBASIC3.85□□□□□ -1.79
TNFRSF4P43489 HMGN1P5-201ENST00000448591 263 ntBASIC3.85□□□□□ -1.79
TNFRSF4P43489 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.85□□□□□ -1.79
TNFRSF4P43489 RNU7-140P-201ENST00000459546 60 ntBASIC3.85□□□□□ -1.79
TNFRSF4P43489 STMN1P2-201ENST00000508435 439 ntBASIC3.85□□□□□ -1.79
TNFRSF4P43489 AC104619.4-201ENST00000510773 249 ntBASIC3.85□□□□□ -1.79
TNFRSF4P43489 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.85□□□□□ -1.79
TNFRSF4P43489 RN7SKP277-201ENST00000516895 283 ntBASIC3.85□□□□□ -1.79
TNFRSF4P43489 AC008802.1-201ENST00000519121 791 ntBASIC3.85□□□□□ -1.79
TNFRSF4P43489 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.85□□□□□ -1.79
TNFRSF4P43489 AP003102.1-201ENST00000525638 661 ntBASIC3.85□□□□□ -1.79
TNFRSF4P43489 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.85□□□□□ -1.79
TNFRSF4P43489 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.85□□□□□ -1.79
TNFRSF4P43489 AC004217.3-201ENST00000551552 878 ntBASIC3.85□□□□□ -1.79
TNFRSF4P43489 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
TNFRSF4P43489 NIFKP8-201ENST00000560500 874 ntBASIC3.85□□□□□ -1.79
TNFRSF4P43489 MTCO1P40-201ENST00000574371 625 ntBASIC3.85□□□□□ -1.79
TNFRSF4P43489 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.85□□□□□ -1.79
TNFRSF4P43489 SRGNP1-201ENST00000603392 451 ntBASIC3.85□□□□□ -1.79
TNFRSF4P43489 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.85□□□□□ -1.79
TNFRSF4P43489 AC006927.2-201ENST00000639256 389 ntBASIC3.85□□□□□ -1.79
TNFRSF4P43489 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.85□□□□□ -1.79
TNFRSF4P43489 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.85□□□□□ -1.79
TNFRSF4P43489 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
TNFRSF4P43489 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
TNFRSF4P43489 AC011266.1-201ENST00000624119 3569 ntBASIC3.85□□□□□ -1.79
TNFRSF4P43489 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TNFRSF4P43489 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.85□□□□□ -1.79
TNFRSF4P43489 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
TNFRSF4P43489 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TNFRSF4P43489 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TNFRSF4P43489 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TNFRSF4P43489 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
TNFRSF4P43489 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
TNFRSF4P43489 RNU1-108P-201ENST00000362556 161 ntBASIC3.84□□□□□ -1.79
TNFRSF4P43489 RNU5B-1-201ENST00000363286 116 ntBASIC3.84□□□□□ -1.79
TNFRSF4P43489 RNA5SP51-201ENST00000364750 119 ntBASIC3.84□□□□□ -1.79
TNFRSF4P43489 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
TNFRSF4P43489 RNU6-549P-201ENST00000384433 107 ntBASIC3.84□□□□□ -1.79
TNFRSF4P43489 AL035405.1-201ENST00000400795 710 ntBASIC3.84□□□□□ -1.79
TNFRSF4P43489 TAF13P2-201ENST00000416876 286 ntBASIC3.84□□□□□ -1.79
TNFRSF4P43489 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.84□□□□□ -1.79
TNFRSF4P43489 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.84□□□□□ -1.79
TNFRSF4P43489 UBE2V1P1-201ENST00000430836 445 ntBASIC3.84□□□□□ -1.79
TNFRSF4P43489 RPS7P2-201ENST00000435134 607 ntBASIC3.84□□□□□ -1.79
TNFRSF4P43489 AC234064.1-201ENST00000436312 247 ntBASIC3.84□□□□□ -1.79
TNFRSF4P43489 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.84□□□□□ -1.79
TNFRSF4P43489 PRDX3P3-201ENST00000447765 522 ntBASIC3.84□□□□□ -1.79
TNFRSF4P43489 BX276092.4-201ENST00000452056 248 ntBASIC3.84□□□□□ -1.79
TNFRSF4P43489 SNORD105B-201ENST00000458770 79 ntBASIC3.84□□□□□ -1.79
TNFRSF4P43489 NAP1L1P3-201ENST00000462291 880 ntBASIC3.84□□□□□ -1.79
TNFRSF4P43489 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms