Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 MIR7-3-201ENST00000384898 110 ntBASIC5.12□□□□□ -1.59
COL15A1P39059 AC114814.2-201ENST00000419195 485 ntBASIC5.12□□□□□ -1.59
COL15A1P39059 AL590609.2-201ENST00000421430 368 ntBASIC5.12□□□□□ -1.59
COL15A1P39059 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.12□□□□□ -1.59
COL15A1P39059 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.12□□□□□ -1.59
COL15A1P39059 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC5.12□□□□□ -1.59
COL15A1P39059 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.12□□□□□ -1.59
COL15A1P39059 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.12□□□□□ -1.59
COL15A1P39059 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.12□□□□□ -1.59
COL15A1P39059 RPS26P28-201ENST00000470806 348 ntBASIC5.12□□□□□ -1.59
COL15A1P39059 RPL7P49-201ENST00000471402 708 ntBASIC5.12□□□□□ -1.59
COL15A1P39059 RN7SL809P-201ENST00000482040 297 ntBASIC5.12□□□□□ -1.59
COL15A1P39059 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.12□□□□□ -1.59
COL15A1P39059 AC010486.3-201ENST00000511602 785 ntBASIC5.12□□□□□ -1.59
COL15A1P39059 IGJP1-201ENST00000522682 475 ntBASIC5.12□□□□□ -1.59
COL15A1P39059 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.12□□□□□ -1.59
COL15A1P39059 AP000619.3-201ENST00000535634 1127 ntBASIC5.12□□□□□ -1.59
COL15A1P39059 CYCSP30-201ENST00000546447 172 ntBASIC5.12□□□□□ -1.59
COL15A1P39059 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.12□□□□□ -1.59
COL15A1P39059 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.12□□□□□ -1.59
COL15A1P39059 AC015726.1-201ENST00000602353 681 ntBASIC5.12□□□□□ -1.59
COL15A1P39059 AP003392.5-201ENST00000607857 415 ntBASIC5.12□□□□□ -1.59
COL15A1P39059 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.12□□□□□ -1.59
COL15A1P39059 AC015908.5-201ENST00000623289 343 ntBASIC5.12□□□□□ -1.59
COL15A1P39059 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.12□□□□□ -1.59
COL15A1P39059 MFSD8-245ENST00000641743 948 ntBASIC5.12□□□□□ -1.59
COL15A1P39059 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.12□□□□□ -1.59
COL15A1P39059 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL15A1P39059 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL15A1P39059 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL15A1P39059 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL15A1P39059 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL15A1P39059 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL15A1P39059 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
COL15A1P39059 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.11□□□□□ -1.59
COL15A1P39059 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL15A1P39059 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL15A1P39059 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.11□□□□□ -1.59
COL15A1P39059 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL15A1P39059 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL15A1P39059 MAPK10-320ENST00000641462 6696 ntBASIC5.11□□□□□ -1.59
COL15A1P39059 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL15A1P39059 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL15A1P39059 Y_RNA.465-201ENST00000384293 102 ntBASIC5.11□□□□□ -1.59
COL15A1P39059 RNU6-83P-201ENST00000384568 112 ntBASIC5.11□□□□□ -1.59
COL15A1P39059 AL356131.1-201ENST00000405826 414 ntBASIC5.11□□□□□ -1.59
COL15A1P39059 RNA5SP296-201ENST00000410523 111 ntBASIC5.11□□□□□ -1.59
COL15A1P39059 RNA5SP146-201ENST00000410743 123 ntBASIC5.11□□□□□ -1.59
COL15A1P39059 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.11□□□□□ -1.59
COL15A1P39059 AC008280.1-201ENST00000418851 412 ntBASIC5.11□□□□□ -1.59
COL15A1P39059 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.11□□□□□ -1.59
COL15A1P39059 MTCO1P3-201ENST00000429327 192 ntBASIC5.11□□□□□ -1.59
COL15A1P39059 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.11□□□□□ -1.59
COL15A1P39059 TPTE2P6-202ENST00000445572 1007 ntBASIC5.11□□□□□ -1.59
COL15A1P39059 AC104978.1-201ENST00000449387 391 ntBASIC5.11□□□□□ -1.59
COL15A1P39059 MRPL42P4-201ENST00000453267 443 ntBASIC5.11□□□□□ -1.59
COL15A1P39059 RPS4XP12-201ENST00000461747 709 ntBASIC5.11□□□□□ -1.59
COL15A1P39059 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
COL15A1P39059 RPS3AP22-201ENST00000488297 769 ntBASIC5.11□□□□□ -1.59
COL15A1P39059 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL15A1P39059 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL15A1P39059 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.11□□□□□ -1.59
COL15A1P39059 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.11□□□□□ -1.59
COL15A1P39059 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL15A1P39059 AC006499.6-201ENST00000511169 607 ntBASIC5.11□□□□□ -1.59
COL15A1P39059 TCP11X3P-202ENST00000514289 1254 ntBASIC5.11□□□□□ -1.59
COL15A1P39059 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL15A1P39059 AC093853.1-201ENST00000515689 483 ntBASIC5.11□□□□□ -1.59
COL15A1P39059 RNU7-143P-201ENST00000516781 65 ntBASIC5.11□□□□□ -1.59
COL15A1P39059 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.11□□□□□ -1.59
COL15A1P39059 AC010306.1-201ENST00000523223 1117 ntBASIC5.11□□□□□ -1.59
COL15A1P39059 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.11□□□□□ -1.59
COL15A1P39059 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.11□□□□□ -1.59
COL15A1P39059 AC025627.2-201ENST00000576220 160 ntBASIC5.11□□□□□ -1.59
COL15A1P39059 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.11□□□□□ -1.59
COL15A1P39059 AC017100.2-201ENST00000584628 355 ntBASIC5.11□□□□□ -1.59
COL15A1P39059 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.11□□□□□ -1.59
COL15A1P39059 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.11□□□□□ -1.59
COL15A1P39059 AC012468.1-201ENST00000604888 430 ntBASIC5.11□□□□□ -1.59
COL15A1P39059 AP000255.1-201ENST00000610276 676 ntBASIC5.11□□□□□ -1.59
COL15A1P39059 AC105227.2-201ENST00000615075 605 ntBASIC5.11□□□□□ -1.59
COL15A1P39059 AC084757.4-201ENST00000616350 526 ntBASIC5.11□□□□□ -1.59
COL15A1P39059 AL157770.1-201ENST00000623049 439 ntBASIC5.11□□□□□ -1.59
COL15A1P39059 AP003399.1-201ENST00000637534 361 ntBASIC5.11□□□□□ -1.59
COL15A1P39059 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
COL15A1P39059 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL15A1P39059 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.11□□□□□ -1.59
COL15A1P39059 MAPK10-349ENST00000641767 3661 ntBASIC5.11□□□□□ -1.59
COL15A1P39059 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL15A1P39059 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL15A1P39059 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.1□□□□□ -1.59
COL15A1P39059 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL15A1P39059 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL15A1P39059 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL15A1P39059 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL15A1P39059 RNU1-108P-201ENST00000362556 161 ntBASIC5.1□□□□□ -1.59
COL15A1P39059 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL15A1P39059 RNU6-317P-201ENST00000384031 107 ntBASIC5.1□□□□□ -1.59
COL15A1P39059 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.1□□□□□ -1.59
COL15A1P39059 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms