Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 METTL21EP-201ENST00000298105 713 ntBASIC3.58□□□□□ -1.84
RORAP35398 AL589826.1-201ENST00000340697 249 ntBASIC3.58□□□□□ -1.84
RORAP35398 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.58□□□□□ -1.84
RORAP35398 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RORAP35398 SNORD3H-201ENST00000384486 214 ntBASIC3.58□□□□□ -1.84
RORAP35398 EIF5P1-201ENST00000400019 1231 ntBASIC3.58□□□□□ -1.84
RORAP35398 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.58□□□□□ -1.84
RORAP35398 RNU2-17P-201ENST00000410290 190 ntBASIC3.58□□□□□ -1.84
RORAP35398 RPS3AP25-201ENST00000411660 793 ntBASIC3.58□□□□□ -1.84
RORAP35398 AL035423.1-201ENST00000420331 213 ntBASIC3.58□□□□□ -1.84
RORAP35398 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.58□□□□□ -1.84
RORAP35398 AC007000.2-201ENST00000442564 487 ntBASIC3.58□□□□□ -1.84
RORAP35398 SETD6P1-201ENST00000444575 317 ntBASIC3.58□□□□□ -1.84
RORAP35398 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.58□□□□□ -1.84
RORAP35398 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.58□□□□□ -1.84
RORAP35398 RNU7-170P-201ENST00000459303 61 ntBASIC3.58□□□□□ -1.84
RORAP35398 AC010307.1-201ENST00000467206 836 ntBASIC3.58□□□□□ -1.84
RORAP35398 AC084198.1-201ENST00000477747 402 ntBASIC3.58□□□□□ -1.84
RORAP35398 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RORAP35398 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.58□□□□□ -1.84
RORAP35398 AC006499.5-201ENST00000505037 514 ntBASIC3.58□□□□□ -1.84
RORAP35398 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.58□□□□□ -1.84
RORAP35398 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.58□□□□□ -1.84
RORAP35398 AC103833.1-201ENST00000517442 172 ntBASIC3.58□□□□□ -1.84
RORAP35398 AC093014.1-201ENST00000548926 724 ntBASIC3.58□□□□□ -1.84
RORAP35398 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.58□□□□□ -1.84
RORAP35398 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.58□□□□□ -1.84
RORAP35398 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.58□□□□□ -1.84
RORAP35398 MIR5047-201ENST00000579212 100 ntBASIC3.58□□□□□ -1.84
RORAP35398 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.58□□□□□ -1.84
RORAP35398 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.58□□□□□ -1.84
RORAP35398 AL354760.1-201ENST00000608357 643 ntBASIC3.58□□□□□ -1.84
RORAP35398 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.58□□□□□ -1.84
RORAP35398 AL118556.2-201ENST00000614375 824 ntBASIC3.58□□□□□ -1.84
RORAP35398 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.58□□□□□ -1.84
RORAP35398 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
RORAP35398 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
RORAP35398 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RORAP35398 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
RORAP35398 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.57□□□□□ -1.84
RORAP35398 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RORAP35398 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RORAP35398 RNU2-6P-201ENST00000411404 190 ntBASIC3.57□□□□□ -1.84
RORAP35398 AC093578.1-201ENST00000415219 368 ntBASIC3.57□□□□□ -1.84
RORAP35398 AL357078.2-201ENST00000416486 427 ntBASIC3.57□□□□□ -1.84
RORAP35398 NUP35P2-201ENST00000416748 943 ntBASIC3.57□□□□□ -1.84
RORAP35398 AC241520.1-201ENST00000422654 1099 ntBASIC3.57□□□□□ -1.84
RORAP35398 OR5AW1P-201ENST00000426334 1006 ntBASIC3.57□□□□□ -1.84
RORAP35398 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RORAP35398 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.57□□□□□ -1.84
RORAP35398 RPL23AP33-201ENST00000442301 452 ntBASIC3.57□□□□□ -1.84
RORAP35398 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.57□□□□□ -1.84
RORAP35398 NPM1P49-201ENST00000448027 714 ntBASIC3.57□□□□□ -1.84
RORAP35398 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.57□□□□□ -1.84
RORAP35398 MTCO3P20-201ENST00000454926 688 ntBASIC3.57□□□□□ -1.84
RORAP35398 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.57□□□□□ -1.84
RORAP35398 snoU13.22-201ENST00000459428 104 ntBASIC3.57□□□□□ -1.84
RORAP35398 RPL23AP14-201ENST00000468281 468 ntBASIC3.57□□□□□ -1.84
RORAP35398 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
RORAP35398 AC108729.2-201ENST00000476543 840 ntBASIC3.57□□□□□ -1.84
RORAP35398 NCOR1P1-202ENST00000486162 291 ntBASIC3.57□□□□□ -1.84
RORAP35398 HMGN1P11-201ENST00000508668 303 ntBASIC3.57□□□□□ -1.84
RORAP35398 RAC1P2-201ENST00000511164 579 ntBASIC3.57□□□□□ -1.84
RORAP35398 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.57□□□□□ -1.84
RORAP35398 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.57□□□□□ -1.84
RORAP35398 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.57□□□□□ -1.84
RORAP35398 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.57□□□□□ -1.84
RORAP35398 AC074029.1-201ENST00000552531 1044 ntBASIC3.57□□□□□ -1.84
RORAP35398 AC090877.1-201ENST00000561418 344 ntBASIC3.57□□□□□ -1.84
RORAP35398 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.57□□□□□ -1.84
RORAP35398 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.57□□□□□ -1.84
RORAP35398 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.57□□□□□ -1.84
RORAP35398 AC018618.2-201ENST00000604770 446 ntBASIC3.57□□□□□ -1.84
RORAP35398 AL450270.1-201ENST00000606160 391 ntBASIC3.57□□□□□ -1.84
RORAP35398 SNORA62.6-201ENST00000606322 83 ntBASIC3.57□□□□□ -1.84
RORAP35398 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.57□□□□□ -1.84
RORAP35398 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.57□□□□□ -1.84
RORAP35398 AC004777.1-201ENST00000624317 287 ntBASIC3.57□□□□□ -1.84
RORAP35398 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.57□□□□□ -1.84
RORAP35398 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
RORAP35398 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RORAP35398 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
RORAP35398 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
RORAP35398 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
RORAP35398 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
RORAP35398 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.57□□□□□ -1.84
RORAP35398 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
RORAP35398 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RORAP35398 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RORAP35398 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
RORAP35398 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RORAP35398 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RORAP35398 RNA5SP51-201ENST00000364750 119 ntBASIC3.56□□□□□ -1.84
RORAP35398 SOD2P1-201ENST00000396543 562 ntBASIC3.56□□□□□ -1.84
RORAP35398 AL356057.1-202ENST00000402263 756 ntBASIC3.56□□□□□ -1.84
RORAP35398 HLFP1-201ENST00000402375 499 ntBASIC3.56□□□□□ -1.84
RORAP35398 MTHFD2P2-201ENST00000407725 247 ntBASIC3.56□□□□□ -1.84
RORAP35398 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.56□□□□□ -1.84
RORAP35398 AC007390.1-201ENST00000415722 356 ntBASIC3.56□□□□□ -1.84
RORAP35398 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms