Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.7□□□□□ -1.82
HOXA9P31269 AC011471.1-201ENST00000585766 187 ntBASIC3.7□□□□□ -1.82
HOXA9P31269 EIF1P6-201ENST00000600054 334 ntBASIC3.7□□□□□ -1.82
HOXA9P31269 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.7□□□□□ -1.82
HOXA9P31269 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HOXA9P31269 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.7□□□□□ -1.82
HOXA9P31269 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXA9P31269 AL354696.1-201ENST00000614652 497 ntBASIC3.7□□□□□ -1.82
HOXA9P31269 AC018816.2-201ENST00000621460 353 ntBASIC3.7□□□□□ -1.82
HOXA9P31269 AL732372.2-225ENST00000642124 456 ntBASIC3.7□□□□□ -1.82
HOXA9P31269 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HOXA9P31269 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
HOXA9P31269 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
HOXA9P31269 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
HOXA9P31269 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.7□□□□□ -1.82
HOXA9P31269 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.7□□□□□ -1.82
HOXA9P31269 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXA9P31269 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.69□□□□□ -1.82
HOXA9P31269 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXA9P31269 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HOXA9P31269 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
HOXA9P31269 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HOXA9P31269 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXA9P31269 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.69□□□□□ -1.82
HOXA9P31269 AC058791.1-201ENST00000608412 3198 ntBASIC3.69□□□□□ -1.82
HOXA9P31269 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HOXA9P31269 RNU6-1251P-201ENST00000364502 107 ntBASIC3.69□□□□□ -1.82
HOXA9P31269 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HOXA9P31269 SNORD65-201ENST00000391079 73 ntBASIC3.69□□□□□ -1.82
HOXA9P31269 U3.39-201ENST00000408569 239 ntBASIC3.69□□□□□ -1.82
HOXA9P31269 RN7SKP53-201ENST00000411337 315 ntBASIC3.69□□□□□ -1.82
HOXA9P31269 AC096664.2-201ENST00000411843 406 ntBASIC3.69□□□□□ -1.82
HOXA9P31269 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HOXA9P31269 HSFY4P-201ENST00000415994 1181 ntBASIC3.69□□□□□ -1.82
HOXA9P31269 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXA9P31269 ARL5AP3-201ENST00000439327 386 ntBASIC3.69□□□□□ -1.82
HOXA9P31269 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HOXA9P31269 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXA9P31269 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.69□□□□□ -1.82
HOXA9P31269 RPL7P47-201ENST00000497299 556 ntBASIC3.69□□□□□ -1.82
HOXA9P31269 PCNAP1-201ENST00000505363 709 ntBASIC3.69□□□□□ -1.82
HOXA9P31269 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXA9P31269 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.69□□□□□ -1.82
HOXA9P31269 SCARNA13-201ENST00000516672 275 ntBASIC3.69□□□□□ -1.82
HOXA9P31269 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.69□□□□□ -1.82
HOXA9P31269 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXA9P31269 AC074029.2-201ENST00000551045 634 ntBASIC3.69□□□□□ -1.82
HOXA9P31269 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.69□□□□□ -1.82
HOXA9P31269 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.69□□□□□ -1.82
HOXA9P31269 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.69□□□□□ -1.82
HOXA9P31269 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.69□□□□□ -1.82
HOXA9P31269 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXA9P31269 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXA9P31269 MIR8057-201ENST00000620957 69 ntBASIC3.69□□□□□ -1.82
HOXA9P31269 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXA9P31269 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
HOXA9P31269 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXA9P31269 AC119674.1-212ENST00000641155 993 ntBASIC3.69□□□□□ -1.82
HOXA9P31269 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXA9P31269 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.68□□□□□ -1.82
HOXA9P31269 AL079305.1-201ENST00000623159 3008 ntBASIC3.68□□□□□ -1.82
HOXA9P31269 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXA9P31269 RNU6-532P-201ENST00000384318 107 ntBASIC3.68□□□□□ -1.82
HOXA9P31269 MIR634-201ENST00000385208 97 ntBASIC3.68□□□□□ -1.82
HOXA9P31269 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXA9P31269 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
HOXA9P31269 AL500527.1-201ENST00000448532 255 ntBASIC3.68□□□□□ -1.82
HOXA9P31269 AC115115.1-201ENST00000449927 248 ntBASIC3.68□□□□□ -1.82
HOXA9P31269 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.68□□□□□ -1.82
HOXA9P31269 DNAJC19P1-201ENST00000455312 319 ntBASIC3.68□□□□□ -1.82
HOXA9P31269 CFTRP1-201ENST00000456646 183 ntBASIC3.68□□□□□ -1.82
HOXA9P31269 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.68□□□□□ -1.82
HOXA9P31269 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXA9P31269 RN7SL594P-201ENST00000470590 287 ntBASIC3.68□□□□□ -1.82
HOXA9P31269 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.68□□□□□ -1.82
HOXA9P31269 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXA9P31269 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXA9P31269 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXA9P31269 AC005798.1-201ENST00000513715 387 ntBASIC3.68□□□□□ -1.82
HOXA9P31269 RNU6-760P-201ENST00000516078 97 ntBASIC3.68□□□□□ -1.82
HOXA9P31269 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXA9P31269 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HOXA9P31269 AC092747.2-201ENST00000545069 983 ntBASIC3.68□□□□□ -1.82
HOXA9P31269 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXA9P31269 LLPHP1-201ENST00000603571 367 ntBASIC3.68□□□□□ -1.82
HOXA9P31269 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.68□□□□□ -1.82
HOXA9P31269 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXA9P31269 U4.6-201ENST00000621618 127 ntBASIC3.68□□□□□ -1.82
HOXA9P31269 LINC00216-201ENST00000623548 1126 ntBASIC3.68□□□□□ -1.82
HOXA9P31269 AC244205.2-202ENST00000635781 342 ntBASIC3.68□□□□□ -1.82
HOXA9P31269 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
HOXA9P31269 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXA9P31269 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXA9P31269 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.68□□□□□ -1.82
HOXA9P31269 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.67□□□□□ -1.82
HOXA9P31269 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
HOXA9P31269 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
HOXA9P31269 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HOXA9P31269 RNF6P1-201ENST00000444889 1784 ntBASIC3.67□□□□□ -1.82
HOXA9P31269 TAF9BP1-201ENST00000396646 746 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms