Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AL392112.1-201ENST00000605115 829 ntBASIC4.07□□□□□ -1.76
CDH3P22223 AL450336.1-201ENST00000605180 586 ntBASIC4.07□□□□□ -1.76
CDH3P22223 AL591034.3-201ENST00000605511 685 ntBASIC4.07□□□□□ -1.76
CDH3P22223 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.07□□□□□ -1.76
CDH3P22223 AC068831.8-201ENST00000620171 435 ntBASIC4.07□□□□□ -1.76
CDH3P22223 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.07□□□□□ -1.76
CDH3P22223 AC008013.2-202ENST00000637965 364 ntBASIC4.07□□□□□ -1.76
CDH3P22223 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDH3P22223 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDH3P22223 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.07□□□□□ -1.76
CDH3P22223 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CDH3P22223 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDH3P22223 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDH3P22223 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDH3P22223 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDH3P22223 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CDH3P22223 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.06□□□□□ -1.76
CDH3P22223 NMD3P1-201ENST00000439704 1488 ntBASIC4.06□□□□□ -1.76
CDH3P22223 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDH3P22223 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.06□□□□□ -1.76
CDH3P22223 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDH3P22223 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH3P22223 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.06□□□□□ -1.76
CDH3P22223 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDH3P22223 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDH3P22223 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.06□□□□□ -1.76
CDH3P22223 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDH3P22223 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDH3P22223 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDH3P22223 SNORD116-12-201ENST00000384468 92 ntBASIC4.06□□□□□ -1.76
CDH3P22223 RNU6-906P-201ENST00000384700 70 ntBASIC4.06□□□□□ -1.76
CDH3P22223 MIR16-1-201ENST00000385271 89 ntBASIC4.06□□□□□ -1.76
CDH3P22223 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CDH3P22223 AL356967.1-201ENST00000406305 431 ntBASIC4.06□□□□□ -1.76
CDH3P22223 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.06□□□□□ -1.76
CDH3P22223 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.06□□□□□ -1.76
CDH3P22223 RPS23P10-201ENST00000416185 486 ntBASIC4.06□□□□□ -1.76
CDH3P22223 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.06□□□□□ -1.76
CDH3P22223 RAC1P8-201ENST00000427086 527 ntBASIC4.06□□□□□ -1.76
CDH3P22223 AC008065.1-201ENST00000428525 348 ntBASIC4.06□□□□□ -1.76
CDH3P22223 NPM1P34-201ENST00000428821 893 ntBASIC4.06□□□□□ -1.76
CDH3P22223 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH3P22223 USP9YP24-201ENST00000434374 697 ntBASIC4.06□□□□□ -1.76
CDH3P22223 USP9YP17-201ENST00000444617 696 ntBASIC4.06□□□□□ -1.76
CDH3P22223 EXTL2P1-201ENST00000446218 416 ntBASIC4.06□□□□□ -1.76
CDH3P22223 HMGN2P7-201ENST00000456186 273 ntBASIC4.06□□□□□ -1.76
CDH3P22223 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH3P22223 AC104689.1-201ENST00000473356 768 ntBASIC4.06□□□□□ -1.76
CDH3P22223 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH3P22223 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
CDH3P22223 AC078817.1-201ENST00000492623 435 ntBASIC4.06□□□□□ -1.76
CDH3P22223 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH3P22223 AC023141.12-201ENST00000512399 199 ntBASIC4.06□□□□□ -1.76
CDH3P22223 MTCO1P30-201ENST00000515244 580 ntBASIC4.06□□□□□ -1.76
CDH3P22223 SNORA70.14-201ENST00000516205 110 ntBASIC4.06□□□□□ -1.76
CDH3P22223 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.06□□□□□ -1.76
CDH3P22223 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.06□□□□□ -1.76
CDH3P22223 PHBP17-201ENST00000528576 541 ntBASIC4.06□□□□□ -1.76
CDH3P22223 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH3P22223 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH3P22223 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.06□□□□□ -1.76
CDH3P22223 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH3P22223 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH3P22223 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH3P22223 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH3P22223 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.06□□□□□ -1.76
CDH3P22223 MIR4644-201ENST00000579929 84 ntBASIC4.06□□□□□ -1.76
CDH3P22223 MIR4666A-201ENST00000580160 79 ntBASIC4.06□□□□□ -1.76
CDH3P22223 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.06□□□□□ -1.76
CDH3P22223 AP001542.2-201ENST00000593141 364 ntBASIC4.06□□□□□ -1.76
CDH3P22223 AP005137.2-201ENST00000609238 400 ntBASIC4.06□□□□□ -1.76
CDH3P22223 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.06□□□□□ -1.76
CDH3P22223 AC019278.1-201ENST00000623516 479 ntBASIC4.06□□□□□ -1.76
CDH3P22223 MIR492-201ENST00000638676 116 ntBASIC4.06□□□□□ -1.76
CDH3P22223 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDH3P22223 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDH3P22223 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDH3P22223 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.06□□□□□ -1.76
CDH3P22223 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
CDH3P22223 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDH3P22223 SGO1P1-201ENST00000603525 1447 ntBASIC4.05□□□□□ -1.76
CDH3P22223 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.05□□□□□ -1.76
CDH3P22223 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDH3P22223 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.05□□□□□ -1.76
CDH3P22223 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDH3P22223 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CDH3P22223 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDH3P22223 RNU6-619P-201ENST00000365146 108 ntBASIC4.05□□□□□ -1.76
CDH3P22223 SNORD6-201ENST00000365444 73 ntBASIC4.05□□□□□ -1.76
CDH3P22223 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
CDH3P22223 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDH3P22223 MIR153-1-201ENST00000384914 90 ntBASIC4.05□□□□□ -1.76
CDH3P22223 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
CDH3P22223 MIR1179-201ENST00000408703 91 ntBASIC4.05□□□□□ -1.76
CDH3P22223 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.05□□□□□ -1.76
CDH3P22223 OR51A3P-201ENST00000413596 924 ntBASIC4.05□□□□□ -1.76
CDH3P22223 AL592310.1-201ENST00000414330 671 ntBASIC4.05□□□□□ -1.76
CDH3P22223 PAICSP7-201ENST00000419829 962 ntBASIC4.05□□□□□ -1.76
CDH3P22223 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.05□□□□□ -1.76
CDH3P22223 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms