Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.85□□□□□ -1.15
CD44P16070 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CD44P16070 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
CD44P16070 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.85□□□□□ -1.15
CD44P16070 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.85□□□□□ -1.15
CD44P16070 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CD44P16070 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CD44P16070 Y_RNA.182-201ENST00000363880 111 ntBASIC7.85□□□□□ -1.15
CD44P16070 RNU5E-7P-201ENST00000365290 117 ntBASIC7.85□□□□□ -1.15
CD44P16070 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CD44P16070 MIR128-2-201ENST00000384893 84 ntBASIC7.85□□□□□ -1.15
CD44P16070 MIR640-201ENST00000385086 96 ntBASIC7.85□□□□□ -1.15
CD44P16070 SNORA46.1-201ENST00000391069 153 ntBASIC7.85□□□□□ -1.15
CD44P16070 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC7.85□□□□□ -1.15
CD44P16070 AC005002.2-201ENST00000438228 269 ntBASIC7.85□□□□□ -1.15
CD44P16070 SNORD121B-201ENST00000458838 81 ntBASIC7.85□□□□□ -1.15
CD44P16070 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC7.85□□□□□ -1.15
CD44P16070 Y_RNA.677-201ENST00000516401 85 ntBASIC7.85□□□□□ -1.15
CD44P16070 Y_RNA.712-201ENST00000517011 92 ntBASIC7.85□□□□□ -1.15
CD44P16070 CASP1-212ENST00000531166 300 ntTSL 5 BASIC7.85□□□□□ -1.15
CD44P16070 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC7.85□□□□□ -1.15
CD44P16070 RPL21P9-201ENST00000556149 474 ntBASIC7.85□□□□□ -1.15
CD44P16070 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.85□□□□□ -1.15
CD44P16070 AC055872.1-201ENST00000570978 278 ntBASIC7.85□□□□□ -1.15
CD44P16070 AC022884.3-201ENST00000579571 248 ntBASIC7.85□□□□□ -1.15
CD44P16070 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.85□□□□□ -1.15
CD44P16070 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC7.85□□□□□ -1.15
CD44P16070 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.85□□□□□ -1.15
CD44P16070 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC7.85□□□□□ -1.15
CD44P16070 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC7.85□□□□□ -1.15
CD44P16070 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.85□□□□□ -1.15
CD44P16070 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CD44P16070 ZNF720P1-201ENST00000562403 1939 ntBASIC7.85□□□□□ -1.15
CD44P16070 AC027088.4-201ENST00000611559 1947 ntBASIC7.85□□□□□ -1.15
CD44P16070 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.85□□□□□ -1.15
CD44P16070 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CD44P16070 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CD44P16070 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CD44P16070 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CD44P16070 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CD44P16070 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CD44P16070 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CD44P16070 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.84□□□□□ -1.15
CD44P16070 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CD44P16070 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
CD44P16070 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CD44P16070 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CD44P16070 AC022819.1-201ENST00000563495 3910 ntBASIC7.84□□□□□ -1.15
CD44P16070 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CD44P16070 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.84□□□□□ -1.15
CD44P16070 OR3A2-201ENST00000408891 1076 ntBASIC7.84□□□□□ -1.15
CD44P16070 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CD44P16070 AL358453.1-201ENST00000422522 250 ntBASIC7.84□□□□□ -1.15
CD44P16070 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CD44P16070 AL161626.1-201ENST00000441480 490 ntBASIC7.84□□□□□ -1.15
CD44P16070 IFNA11P-201ENST00000446352 526 ntBASIC7.84□□□□□ -1.15
CD44P16070 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC7.84□□□□□ -1.15
CD44P16070 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC7.84□□□□□ -1.15
CD44P16070 RNU7-87P-201ENST00000459343 62 ntBASIC7.84□□□□□ -1.15
CD44P16070 RN7SL228P-201ENST00000470060 303 ntBASIC7.84□□□□□ -1.15
CD44P16070 ATP5LP5-201ENST00000483050 299 ntBASIC7.84□□□□□ -1.15
CD44P16070 RN7SL306P-201ENST00000492941 296 ntBASIC7.84□□□□□ -1.15
CD44P16070 MINOS1P4-201ENST00000515470 318 ntBASIC7.84□□□□□ -1.15
CD44P16070 RNU6-537P-201ENST00000517277 103 ntBASIC7.84□□□□□ -1.15
CD44P16070 SOD1P3-201ENST00000518682 454 ntBASIC7.84□□□□□ -1.15
CD44P16070 SUMO2P18-201ENST00000518873 252 ntBASIC7.84□□□□□ -1.15
CD44P16070 AC023827.2-201ENST00000566880 1061 ntBASIC7.84□□□□□ -1.15
CD44P16070 AC005828.6-201ENST00000606610 232 ntBASIC7.84□□□□□ -1.15
CD44P16070 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
CD44P16070 MIR6732-201ENST00000619365 60 ntBASIC7.84□□□□□ -1.15
CD44P16070 AC211433.3-201ENST00000623770 375 ntBASIC7.84□□□□□ -1.15
CD44P16070 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC7.84□□□□□ -1.15
CD44P16070 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CD44P16070 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CD44P16070 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.84□□□□□ -1.15
CD44P16070 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC7.84□□□□□ -1.15
CD44P16070 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CD44P16070 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CD44P16070 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.84□□□□□ -1.15
CD44P16070 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
CD44P16070 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CD44P16070 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC7.84□□□□□ -1.15
CD44P16070 MROH3P-201ENST00000435735 2676 ntBASIC7.84□□□□□ -1.16
CD44P16070 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.84□□□□□ -1.16
CD44P16070 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.16
CD44P16070 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
CD44P16070 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.83□□□□□ -1.16
CD44P16070 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
CD44P16070 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
CD44P16070 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CD44P16070 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
CD44P16070 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.83□□□□□ -1.16
CD44P16070 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.83□□□□□ -1.16
CD44P16070 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CD44P16070 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.83□□□□□ -1.16
CD44P16070 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.83□□□□□ -1.16
CD44P16070 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
CD44P16070 AC110597.1-201ENST00000562669 3176 ntBASIC7.83□□□□□ -1.16
CD44P16070 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CD44P16070 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms