Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.13□□□□□ -1.59
CFTRP13569 AC096947.1-201ENST00000603233 470 ntBASIC5.13□□□□□ -1.59
CFTRP13569 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.13□□□□□ -1.59
CFTRP13569 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC5.13□□□□□ -1.59
CFTRP13569 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CFTRP13569 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CFTRP13569 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CFTRP13569 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CFTRP13569 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.12□□□□□ -1.59
CFTRP13569 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CFTRP13569 SNORA9.2-201ENST00000365361 133 ntBASIC5.12□□□□□ -1.59
CFTRP13569 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.12□□□□□ -1.59
CFTRP13569 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.12□□□□□ -1.59
CFTRP13569 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CFTRP13569 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CFTRP13569 ASNSP3-201ENST00000451989 1306 ntBASIC5.12□□□□□ -1.59
CFTRP13569 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CFTRP13569 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CFTRP13569 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC5.11□□□□□ -1.59
CFTRP13569 HSPE1P6-201ENST00000479457 291 ntBASIC5.11□□□□□ -1.59
CFTRP13569 AC104687.1-201ENST00000485829 412 ntBASIC5.11□□□□□ -1.59
CFTRP13569 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.11□□□□□ -1.59
CFTRP13569 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.11□□□□□ -1.59
CFTRP13569 BNIP3P10-201ENST00000605360 577 ntBASIC5.11□□□□□ -1.59
CFTRP13569 AC009237.17-201ENST00000618111 748 ntBASIC5.11□□□□□ -1.59
CFTRP13569 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.11□□□□□ -1.59
CFTRP13569 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CFTRP13569 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CFTRP13569 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CFTRP13569 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CFTRP13569 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CFTRP13569 MIR9-1-201ENST00000385198 89 ntBASIC5.1□□□□□ -1.59
CFTRP13569 RNU2-52P-201ENST00000410680 190 ntBASIC5.1□□□□□ -1.59
CFTRP13569 AL592148.1-201ENST00000413568 445 ntBASIC5.1□□□□□ -1.59
CFTRP13569 NPM1P24-201ENST00000428039 894 ntBASIC5.1□□□□□ -1.59
CFTRP13569 HMGB3P11-201ENST00000440127 604 ntBASIC5.1□□□□□ -1.59
CFTRP13569 MTCO3P16-201ENST00000454456 754 ntBASIC5.1□□□□□ -1.59
CFTRP13569 RPL31P13-201ENST00000484151 370 ntBASIC5.1□□□□□ -1.59
CFTRP13569 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.1□□□□□ -1.59
CFTRP13569 AC015871.2-201ENST00000603605 948 ntBASIC5.1□□□□□ -1.59
CFTRP13569 AC007566.2-201ENST00000603642 413 ntBASIC5.1□□□□□ -1.59
CFTRP13569 AL035413.2-201ENST00000604801 525 ntBASIC5.1□□□□□ -1.59
CFTRP13569 AL590808.1-201ENST00000618696 141 ntBASIC5.1□□□□□ -1.59
CFTRP13569 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CFTRP13569 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.1□□□□□ -1.59
CFTRP13569 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CFTRP13569 KPNA2P2-201ENST00000419546 1489 ntBASIC5.1□□□□□ -1.59
CFTRP13569 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CFTRP13569 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CFTRP13569 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CFTRP13569 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC5.09□□□□□ -1.59
CFTRP13569 MIR30E-201ENST00000362104 92 ntBASIC5.09□□□□□ -1.59
CFTRP13569 RNU6-859P-201ENST00000362728 107 ntBASIC5.09□□□□□ -1.59
CFTRP13569 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.09□□□□□ -1.59
CFTRP13569 AC023389.2-201ENST00000580031 955 ntBASIC5.09□□□□□ -1.59
CFTRP13569 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.09□□□□□ -1.59
CFTRP13569 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC5.09□□□□□ -1.59
CFTRP13569 IDE-202ENST00000371581 4480 ntTSL 2 BASIC5.09□□□□□ -1.59
CFTRP13569 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CFTRP13569 AC116096.1-201ENST00000566804 2314 ntBASIC5.09□□□□□ -1.6
CFTRP13569 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CFTRP13569 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CFTRP13569 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CFTRP13569 MAPK10-373ENST00000641983 6772 ntBASIC5.08□□□□□ -1.6
CFTRP13569 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CFTRP13569 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.08□□□□□ -1.6
CFTRP13569 AL513328.1-201ENST00000446460 224 ntBASIC5.08□□□□□ -1.6
CFTRP13569 EEF1B2P7-201ENST00000451177 676 ntBASIC5.08□□□□□ -1.6
CFTRP13569 AC090543.2-201ENST00000483963 348 ntBASIC5.08□□□□□ -1.6
CFTRP13569 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.08□□□□□ -1.6
CFTRP13569 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.08□□□□□ -1.6
CFTRP13569 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.08□□□□□ -1.6
CFTRP13569 AC234778.2-201ENST00000566241 354 ntBASIC5.08□□□□□ -1.6
CFTRP13569 MIR5047-201ENST00000579212 100 ntBASIC5.08□□□□□ -1.6
CFTRP13569 PLCE1P1-201ENST00000622094 305 ntBASIC5.08□□□□□ -1.6
CFTRP13569 RPS4XP5-202ENST00000449995 1334 ntBASIC5.08□□□□□ -1.6
CFTRP13569 AL365361.1-201ENST00000566942 3481 ntBASIC5.08□□□□□ -1.6
CFTRP13569 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CFTRP13569 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CFTRP13569 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CFTRP13569 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.07□□□□□ -1.6
CFTRP13569 SNORA70B-201ENST00000384210 135 ntBASIC5.07□□□□□ -1.6
CFTRP13569 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CFTRP13569 AL513124.1-201ENST00000450410 614 ntBASIC5.07□□□□□ -1.6
CFTRP13569 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.07□□□□□ -1.6
CFTRP13569 AC091903.1-201ENST00000624322 454 ntBASIC5.07□□□□□ -1.6
CFTRP13569 AC073476.4-201ENST00000628409 72 ntBASIC5.07□□□□□ -1.6
CFTRP13569 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CFTRP13569 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CFTRP13569 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CFTRP13569 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.07□□□□□ -1.6
CFTRP13569 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CFTRP13569 RSL24D1P4-201ENST00000400938 484 ntBASIC5.07□□□□□ -1.6
CFTRP13569 NPM1P11-201ENST00000417106 855 ntBASIC5.07□□□□□ -1.6
CFTRP13569 FTH1P1-201ENST00000437933 532 ntBASIC5.07□□□□□ -1.6
CFTRP13569 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.07□□□□□ -1.6
CFTRP13569 RN7SL20P-201ENST00000488827 297 ntBASIC5.07□□□□□ -1.6
CFTRP13569 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.07□□□□□ -1.6
CFTRP13569 RNU1-143P-201ENST00000516296 146 ntBASIC5.07□□□□□ -1.6
CFTRP13569 HMGB1P19-201ENST00000517578 577 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms