Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC104629.1-201ENST00000494226 508 ntBASIC3.54□□□□□ -1.84
HOXC4P09017 FTH1P24-201ENST00000503502 462 ntBASIC3.54□□□□□ -1.84
HOXC4P09017 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HOXC4P09017 BTF3L4P4-201ENST00000506381 449 ntBASIC3.54□□□□□ -1.84
HOXC4P09017 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXC4P09017 AC010374.2-201ENST00000512933 535 ntBASIC3.54□□□□□ -1.84
HOXC4P09017 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXC4P09017 SOD1P3-201ENST00000518682 454 ntBASIC3.54□□□□□ -1.84
HOXC4P09017 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXC4P09017 MTND5P21-201ENST00000531961 522 ntBASIC3.54□□□□□ -1.84
HOXC4P09017 TRAV15-201ENST00000556680 249 ntBASIC3.54□□□□□ -1.84
HOXC4P09017 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXC4P09017 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXC4P09017 AC115621.1-201ENST00000604653 858 ntBASIC3.54□□□□□ -1.84
HOXC4P09017 AC006077.1-201ENST00000604746 343 ntBASIC3.54□□□□□ -1.84
HOXC4P09017 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXC4P09017 AC069200.1-201ENST00000609511 323 ntBASIC3.54□□□□□ -1.84
HOXC4P09017 MIR486-1-201ENST00000612171 68 ntBASIC3.54□□□□□ -1.84
HOXC4P09017 AC006249.1-201ENST00000621223 471 ntBASIC3.54□□□□□ -1.84
HOXC4P09017 AC244100.1-202ENST00000621554 382 ntBASIC3.54□□□□□ -1.84
HOXC4P09017 LINC00216-201ENST00000623548 1126 ntBASIC3.54□□□□□ -1.84
HOXC4P09017 AP006248.3-201ENST00000623580 594 ntBASIC3.54□□□□□ -1.84
HOXC4P09017 U6.105-201ENST00000637379 88 ntBASIC3.54□□□□□ -1.84
HOXC4P09017 AL392088.2-201ENST00000637607 285 ntBASIC3.54□□□□□ -1.84
HOXC4P09017 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
HOXC4P09017 AL353743.4-201ENST00000422653 1547 ntBASIC3.54□□□□□ -1.84
HOXC4P09017 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.53□□□□□ -1.84
HOXC4P09017 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HOXC4P09017 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HOXC4P09017 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
HOXC4P09017 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HOXC4P09017 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HOXC4P09017 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
HOXC4P09017 MIR34B-201ENST00000385076 84 ntBASIC3.53□□□□□ -1.84
HOXC4P09017 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HOXC4P09017 HSPE1P8-201ENST00000406997 288 ntBASIC3.53□□□□□ -1.84
HOXC4P09017 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXC4P09017 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.53□□□□□ -1.84
HOXC4P09017 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.53□□□□□ -1.84
HOXC4P09017 AC006946.1-201ENST00000429106 328 ntBASIC3.53□□□□□ -1.84
HOXC4P09017 AL159987.2-201ENST00000432754 307 ntBASIC3.53□□□□□ -1.84
HOXC4P09017 USP9YP7-201ENST00000436723 430 ntBASIC3.53□□□□□ -1.84
HOXC4P09017 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXC4P09017 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HOXC4P09017 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.53□□□□□ -1.84
HOXC4P09017 MTND5P8-201ENST00000449817 1083 ntBASIC3.53□□□□□ -1.84
HOXC4P09017 USP9YP32-201ENST00000452432 430 ntBASIC3.53□□□□□ -1.84
HOXC4P09017 AC107398.1-201ENST00000486904 505 ntBASIC3.53□□□□□ -1.84
HOXC4P09017 AC090543.1-201ENST00000492168 485 ntBASIC3.53□□□□□ -1.84
HOXC4P09017 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
HOXC4P09017 RNU6-760P-201ENST00000516078 97 ntBASIC3.53□□□□□ -1.84
HOXC4P09017 RNU6-415P-201ENST00000516252 97 ntBASIC3.53□□□□□ -1.84
HOXC4P09017 RNA5SP309-201ENST00000516670 106 ntBASIC3.53□□□□□ -1.84
HOXC4P09017 NARSP2-201ENST00000518524 679 ntBASIC3.53□□□□□ -1.84
HOXC4P09017 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HOXC4P09017 OR4A2P-201ENST00000527276 913 ntBASIC3.53□□□□□ -1.84
HOXC4P09017 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXC4P09017 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.53□□□□□ -1.84
HOXC4P09017 AC023161.2-201ENST00000551218 780 ntBASIC3.53□□□□□ -1.84
HOXC4P09017 KLKP1-201ENST00000595979 403 ntBASIC3.53□□□□□ -1.84
HOXC4P09017 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.53□□□□□ -1.84
HOXC4P09017 AP003117.1-201ENST00000602771 554 ntBASIC3.53□□□□□ -1.84
HOXC4P09017 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXC4P09017 AC110792.4-201ENST00000609843 298 ntBASIC3.53□□□□□ -1.84
HOXC4P09017 AC084757.4-201ENST00000616350 526 ntBASIC3.53□□□□□ -1.84
HOXC4P09017 MIR7975-201ENST00000619350 68 ntBASIC3.53□□□□□ -1.84
HOXC4P09017 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.53□□□□□ -1.84
HOXC4P09017 AL357559.1-201ENST00000622228 274 ntBASIC3.53□□□□□ -1.84
HOXC4P09017 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HOXC4P09017 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HOXC4P09017 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.53□□□□□ -1.84
HOXC4P09017 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
HOXC4P09017 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
HOXC4P09017 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HOXC4P09017 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HOXC4P09017 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXC4P09017 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HOXC4P09017 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HOXC4P09017 RNA5SP72-201ENST00000364442 117 ntBASIC3.52□□□□□ -1.85
HOXC4P09017 U3.39-201ENST00000408569 239 ntBASIC3.52□□□□□ -1.85
HOXC4P09017 AC245052.5-201ENST00000416320 649 ntBASIC3.52□□□□□ -1.85
HOXC4P09017 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXC4P09017 AP000907.1-201ENST00000428428 510 ntBASIC3.52□□□□□ -1.85
HOXC4P09017 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.52□□□□□ -1.85
HOXC4P09017 AL158053.1-201ENST00000441503 453 ntBASIC3.52□□□□□ -1.85
HOXC4P09017 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXC4P09017 HMGB3P8-201ENST00000449709 577 ntBASIC3.52□□□□□ -1.85
HOXC4P09017 snoU13.22-201ENST00000459428 104 ntBASIC3.52□□□□□ -1.85
HOXC4P09017 AC087385.1-201ENST00000475062 312 ntBASIC3.52□□□□□ -1.85
HOXC4P09017 AC026784.1-201ENST00000507986 352 ntBASIC3.52□□□□□ -1.85
HOXC4P09017 OR4U1P-201ENST00000554958 912 ntBASIC3.52□□□□□ -1.85
HOXC4P09017 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.52□□□□□ -1.85
HOXC4P09017 MIR3186-201ENST00000577404 85 ntBASIC3.52□□□□□ -1.85
HOXC4P09017 MTCO3P22-201ENST00000603219 784 ntBASIC3.52□□□□□ -1.85
HOXC4P09017 AL355802.4-201ENST00000607635 548 ntBASIC3.52□□□□□ -1.85
HOXC4P09017 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXC4P09017 AC022306.3-201ENST00000619930 550 ntBASIC3.52□□□□□ -1.85
HOXC4P09017 AL592494.2-201ENST00000425455 1548 ntBASIC3.52□□□□□ -1.85
HOXC4P09017 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
HOXC4P09017 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms