Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
RETP07949 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.74□□□□□ -1.81
RETP07949 AC091152.2-201ENST00000591628 2569 ntBASIC3.74□□□□□ -1.81
RETP07949 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.74□□□□□ -1.81
RETP07949 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RETP07949 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
RETP07949 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RETP07949 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
RETP07949 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.73□□□□□ -1.81
RETP07949 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
RETP07949 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
RETP07949 AC004944.1-201ENST00000517807 3059 ntBASIC3.73□□□□□ -1.81
RETP07949 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RETP07949 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
RETP07949 MIR7-1-201ENST00000384871 110 ntBASIC3.73□□□□□ -1.81
RETP07949 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.73□□□□□ -1.81
RETP07949 HLFP1-201ENST00000402375 499 ntBASIC3.73□□□□□ -1.81
RETP07949 PRELID3BP11-201ENST00000414230 479 ntBASIC3.73□□□□□ -1.81
RETP07949 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.73□□□□□ -1.81
RETP07949 BTF3P9-201ENST00000418784 283 ntBASIC3.73□□□□□ -1.81
RETP07949 AL049610.1-201ENST00000423374 372 ntBASIC3.73□□□□□ -1.81
RETP07949 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.73□□□□□ -1.81
RETP07949 AC005326.1-201ENST00000429197 123 ntBASIC3.73□□□□□ -1.81
RETP07949 AL591503.2-201ENST00000442314 1005 ntBASIC3.73□□□□□ -1.81
RETP07949 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.73□□□□□ -1.81
RETP07949 DNAJC19P1-201ENST00000455312 319 ntBASIC3.73□□□□□ -1.81
RETP07949 AC005229.2-201ENST00000456995 399 ntBASIC3.73□□□□□ -1.81
RETP07949 UBDP1-202ENST00000457888 382 ntBASIC3.73□□□□□ -1.81
RETP07949 AP000893.1-201ENST00000474462 794 ntBASIC3.73□□□□□ -1.81
RETP07949 AC023050.1-201ENST00000498198 304 ntBASIC3.73□□□□□ -1.81
RETP07949 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.73□□□□□ -1.81
RETP07949 ACTR6P1-201ENST00000514311 1104 ntBASIC3.73□□□□□ -1.81
RETP07949 RNU6-1308P-201ENST00000516817 103 ntBASIC3.73□□□□□ -1.81
RETP07949 AC103843.2-201ENST00000530523 682 ntBASIC3.73□□□□□ -1.81
RETP07949 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.73□□□□□ -1.81
RETP07949 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.73□□□□□ -1.81
RETP07949 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.73□□□□□ -1.81
RETP07949 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.73□□□□□ -1.81
RETP07949 AC067852.4-201ENST00000590314 478 ntBASIC3.73□□□□□ -1.81
RETP07949 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.73□□□□□ -1.81
RETP07949 MIR7851-201ENST00000610611 160 ntBASIC3.73□□□□□ -1.81
RETP07949 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.73□□□□□ -1.81
RETP07949 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RETP07949 AC119674.1-207ENST00000641355 633 ntBASIC3.73□□□□□ -1.81
RETP07949 AC119674.1-220ENST00000641502 1048 ntBASIC3.73□□□□□ -1.81
RETP07949 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RETP07949 AC138915.3-201ENST00000562908 1389 ntBASIC3.73□□□□□ -1.81
RETP07949 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RETP07949 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
RETP07949 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.72□□□□□ -1.81
RETP07949 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.72□□□□□ -1.81
RETP07949 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RETP07949 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RETP07949 AC083799.1-201ENST00000366451 910 ntBASIC3.72□□□□□ -1.81
RETP07949 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RETP07949 MIR320B1-201ENST00000390209 79 ntBASIC3.72□□□□□ -1.81
RETP07949 SNORA48.5-201ENST00000391143 135 ntBASIC3.72□□□□□ -1.81
RETP07949 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.72□□□□□ -1.81
RETP07949 ELOCP6-201ENST00000429066 328 ntBASIC3.72□□□□□ -1.81
RETP07949 AC005019.1-201ENST00000436455 431 ntBASIC3.72□□□□□ -1.81
RETP07949 MTCYBP31-201ENST00000438855 1122 ntBASIC3.72□□□□□ -1.81
RETP07949 AC245517.2-201ENST00000442890 346 ntBASIC3.72□□□□□ -1.81
RETP07949 ELOCP12-201ENST00000458706 328 ntBASIC3.72□□□□□ -1.81
RETP07949 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.72□□□□□ -1.81
RETP07949 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.72□□□□□ -1.81
RETP07949 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.72□□□□□ -1.81
RETP07949 RNU6-491P-201ENST00000516099 110 ntBASIC3.72□□□□□ -1.81
RETP07949 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.72□□□□□ -1.81
RETP07949 AC074029.2-201ENST00000551045 634 ntBASIC3.72□□□□□ -1.81
RETP07949 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.72□□□□□ -1.81
RETP07949 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.72□□□□□ -1.81
RETP07949 BX322635.1-201ENST00000605804 496 ntBASIC3.72□□□□□ -1.81
RETP07949 AL354760.1-201ENST00000608357 643 ntBASIC3.72□□□□□ -1.81
RETP07949 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RETP07949 MIR4278-201ENST00000636094 69 ntBASIC3.72□□□□□ -1.81
RETP07949 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.72□□□□□ -1.81
RETP07949 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RETP07949 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RETP07949 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
RETP07949 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
RETP07949 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
RETP07949 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.72□□□□□ -1.81
RETP07949 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.71□□□□□ -1.81
RETP07949 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RETP07949 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.71□□□□□ -1.82
RETP07949 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.71□□□□□ -1.82
RETP07949 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
RETP07949 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
RETP07949 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RETP07949 RPL7P60-201ENST00000397636 735 ntBASIC3.71□□□□□ -1.82
RETP07949 MIR1289-1-201ENST00000408836 144 ntBASIC3.71□□□□□ -1.82
RETP07949 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.71□□□□□ -1.82
RETP07949 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.71□□□□□ -1.82
RETP07949 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RETP07949 RPL31P45-201ENST00000419532 356 ntBASIC3.71□□□□□ -1.82
RETP07949 RPL21P109-201ENST00000422213 475 ntBASIC3.71□□□□□ -1.82
RETP07949 OR5AW1P-201ENST00000426334 1006 ntBASIC3.71□□□□□ -1.82
RETP07949 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.71□□□□□ -1.82
RETP07949 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.71□□□□□ -1.82
RETP07949 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms