Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 RPL31P52-201ENST00000407532 367 ntBASIC2.75□□□□□ -1.97
CTSDP07339 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.75□□□□□ -1.97
CTSDP07339 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.75□□□□□ -1.97
CTSDP07339 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CTSDP07339 RPL36AP36-201ENST00000418616 301 ntBASIC2.75□□□□□ -1.97
CTSDP07339 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.75□□□□□ -1.97
CTSDP07339 AL035423.1-201ENST00000420331 213 ntBASIC2.75□□□□□ -1.97
CTSDP07339 RPL30P3-201ENST00000424262 333 ntBASIC2.75□□□□□ -1.97
CTSDP07339 DPPA2P1-201ENST00000428060 556 ntBASIC2.75□□□□□ -1.97
CTSDP07339 AL353705.1-201ENST00000433468 480 ntBASIC2.75□□□□□ -1.97
CTSDP07339 AC007389.2-201ENST00000434630 306 ntBASIC2.75□□□□□ -1.97
CTSDP07339 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CTSDP07339 AL359073.1-201ENST00000448036 403 ntBASIC2.75□□□□□ -1.97
CTSDP07339 AC089999.1-201ENST00000460336 374 ntBASIC2.75□□□□□ -1.97
CTSDP07339 AC020898.1-201ENST00000474167 787 ntBASIC2.75□□□□□ -1.97
CTSDP07339 RN7SL283P-201ENST00000489055 303 ntBASIC2.75□□□□□ -1.97
CTSDP07339 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC2.75□□□□□ -1.97
CTSDP07339 AC023141.12-201ENST00000512399 199 ntBASIC2.75□□□□□ -1.97
CTSDP07339 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.75□□□□□ -1.97
CTSDP07339 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.75□□□□□ -1.97
CTSDP07339 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.75□□□□□ -1.97
CTSDP07339 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
CTSDP07339 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.75□□□□□ -1.97
CTSDP07339 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.75□□□□□ -1.97
CTSDP07339 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.75□□□□□ -1.97
CTSDP07339 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.75□□□□□ -1.97
CTSDP07339 AP001180.3-201ENST00000582221 145 ntBASIC2.75□□□□□ -1.97
CTSDP07339 AC010591.1-201ENST00000603941 649 ntBASIC2.75□□□□□ -1.97
CTSDP07339 RMST_5.1-201ENST00000618704 126 ntBASIC2.75□□□□□ -1.97
CTSDP07339 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.75□□□□□ -1.97
CTSDP07339 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC2.75□□□□□ -1.97
CTSDP07339 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC2.75□□□□□ -1.97
CTSDP07339 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
CTSDP07339 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CTSDP07339 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CTSDP07339 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
CTSDP07339 FAM35CP-201ENST00000554755 2470 ntBASIC2.75□□□□□ -1.97
CTSDP07339 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.75□□□□□ -1.97
CTSDP07339 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CTSDP07339 MTND5P7-201ENST00000413558 1798 ntBASIC2.74□□□□□ -1.97
CTSDP07339 RNA5SP197-201ENST00000363357 119 ntBASIC2.74□□□□□ -1.97
CTSDP07339 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.74□□□□□ -1.97
CTSDP07339 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC2.74□□□□□ -1.97
CTSDP07339 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC2.74□□□□□ -1.97
CTSDP07339 TRGV6-201ENST00000417928 299 ntBASIC2.74□□□□□ -1.97
CTSDP07339 AC007563.3-201ENST00000433233 371 ntBASIC2.74□□□□□ -1.97
CTSDP07339 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC2.74□□□□□ -1.97
CTSDP07339 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.74□□□□□ -1.97
CTSDP07339 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.74□□□□□ -1.97
CTSDP07339 RPS15AP29-201ENST00000445539 400 ntBASIC2.74□□□□□ -1.97
CTSDP07339 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.74□□□□□ -1.97
CTSDP07339 AC078817.1-201ENST00000492623 435 ntBASIC2.74□□□□□ -1.97
CTSDP07339 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.74□□□□□ -1.97
CTSDP07339 CDH12P2-201ENST00000504393 298 ntBASIC2.74□□□□□ -1.97
CTSDP07339 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.74□□□□□ -1.97
CTSDP07339 AC113398.2-201ENST00000507630 558 ntBASIC2.74□□□□□ -1.97
CTSDP07339 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.74□□□□□ -1.97
CTSDP07339 RNA5SP385-201ENST00000515947 110 ntBASIC2.74□□□□□ -1.97
CTSDP07339 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC2.74□□□□□ -1.97
CTSDP07339 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.74□□□□□ -1.97
CTSDP07339 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC2.74□□□□□ -1.97
CTSDP07339 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.74□□□□□ -1.97
CTSDP07339 AL354950.1-201ENST00000614150 568 ntBASIC2.74□□□□□ -1.97
CTSDP07339 AL121772.2-201ENST00000614331 297 ntBASIC2.74□□□□□ -1.97
CTSDP07339 AL161637.1-201ENST00000622380 412 ntBASIC2.74□□□□□ -1.97
CTSDP07339 AC091903.1-201ENST00000624322 454 ntBASIC2.74□□□□□ -1.97
CTSDP07339 AC009950.2-201ENST00000636548 183 ntBASIC2.74□□□□□ -1.97
CTSDP07339 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.74□□□□□ -1.97
CTSDP07339 AC110774.1-201ENST00000623567 2018 ntBASIC2.74□□□□□ -1.97
CTSDP07339 AL118496.1-201ENST00000440201 1812 ntBASIC2.74□□□□□ -1.97
CTSDP07339 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.74□□□□□ -1.97
CTSDP07339 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CTSDP07339 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CTSDP07339 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CTSDP07339 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CTSDP07339 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CTSDP07339 AC093831.2-201ENST00000624393 3427 ntBASIC2.73□□□□□ -1.97
CTSDP07339 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CTSDP07339 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.73□□□□□ -1.97
CTSDP07339 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.73□□□□□ -1.97
CTSDP07339 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CTSDP07339 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CTSDP07339 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CTSDP07339 RNA5SP119-201ENST00000362715 117 ntBASIC2.73□□□□□ -1.97
CTSDP07339 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CTSDP07339 SNORA46-201ENST00000384762 135 ntBASIC2.73□□□□□ -1.97
CTSDP07339 RPL21P17-201ENST00000397467 475 ntBASIC2.73□□□□□ -1.97
CTSDP07339 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.73□□□□□ -1.97
CTSDP07339 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.73□□□□□ -1.97
CTSDP07339 SDCBPP3-201ENST00000419629 891 ntBASIC2.73□□□□□ -1.97
CTSDP07339 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.73□□□□□ -1.97
CTSDP07339 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.73□□□□□ -1.97
CTSDP07339 HMGB3P6-201ENST00000444896 598 ntBASIC2.73□□□□□ -1.97
CTSDP07339 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC2.73□□□□□ -1.97
CTSDP07339 CCRL1P1-201ENST00000449542 1053 ntBASIC2.73□□□□□ -1.97
CTSDP07339 UQCRHP3-201ENST00000451503 251 ntBASIC2.73□□□□□ -1.97
CTSDP07339 SUN3-208ENST00000453192 801 ntTSL 5 BASIC2.73□□□□□ -1.97
CTSDP07339 RN7SL75P-201ENST00000461926 281 ntBASIC2.73□□□□□ -1.97
CTSDP07339 AC092754.2-201ENST00000463506 460 ntBASIC2.73□□□□□ -1.97
CTSDP07339 RN7SL542P-201ENST00000467147 294 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms