Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 RNU6-723P-201ENST00000383973 107 ntBASIC4.8□□□□□ -1.64
VPS4BO75351 UBE2V1P10-201ENST00000414685 269 ntBASIC4.8□□□□□ -1.64
VPS4BO75351 ELOCP17-201ENST00000414751 326 ntBASIC4.8□□□□□ -1.64
VPS4BO75351 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS4BO75351 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS4BO75351 BX323845.1-201ENST00000432417 179 ntBASIC4.8□□□□□ -1.64
VPS4BO75351 BMS1P19-201ENST00000433925 393 ntBASIC4.8□□□□□ -1.64
VPS4BO75351 MTND1P28-201ENST00000435623 950 ntBASIC4.8□□□□□ -1.64
VPS4BO75351 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS4BO75351 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
VPS4BO75351 KNOP1P3-201ENST00000446933 426 ntBASIC4.8□□□□□ -1.64
VPS4BO75351 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS4BO75351 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VPS4BO75351 AC092647.2-201ENST00000452998 253 ntBASIC4.8□□□□□ -1.64
VPS4BO75351 SSXP1-201ENST00000453640 473 ntBASIC4.8□□□□□ -1.64
VPS4BO75351 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS4BO75351 AP000893.1-201ENST00000474462 794 ntBASIC4.8□□□□□ -1.64
VPS4BO75351 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS4BO75351 MTCYBP43-201ENST00000513621 740 ntBASIC4.8□□□□□ -1.64
VPS4BO75351 RNU6-405P-201ENST00000516637 110 ntBASIC4.8□□□□□ -1.64
VPS4BO75351 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.8□□□□□ -1.64
VPS4BO75351 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS4BO75351 OR4A12P-201ENST00000530847 918 ntBASIC4.8□□□□□ -1.64
VPS4BO75351 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS4BO75351 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS4BO75351 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS4BO75351 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS4BO75351 AC090502.2-201ENST00000549267 280 ntBASIC4.8□□□□□ -1.64
VPS4BO75351 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS4BO75351 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS4BO75351 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS4BO75351 MIR4284-201ENST00000578924 81 ntBASIC4.8□□□□□ -1.64
VPS4BO75351 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS4BO75351 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS4BO75351 SNORD91B-202ENST00000608459 222 ntBASIC4.8□□□□□ -1.64
VPS4BO75351 Z99129.1-201ENST00000612510 255 ntBASIC4.8□□□□□ -1.64
VPS4BO75351 AC123768.4-201ENST00000616244 701 ntBASIC4.8□□□□□ -1.64
VPS4BO75351 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.8□□□□□ -1.64
VPS4BO75351 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS4BO75351 MAPK10-286ENST00000641208 8747 ntBASIC4.8□□□□□ -1.64
VPS4BO75351 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS4BO75351 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
VPS4BO75351 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS4BO75351 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VPS4BO75351 AC005832.2-201ENST00000538921 1430 ntBASIC4.8□□□□□ -1.64
VPS4BO75351 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VPS4BO75351 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS4BO75351 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
VPS4BO75351 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS4BO75351 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
VPS4BO75351 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
VPS4BO75351 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS4BO75351 AL118496.1-201ENST00000440201 1812 ntBASIC4.79□□□□□ -1.64
VPS4BO75351 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS4BO75351 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS4BO75351 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
VPS4BO75351 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS4BO75351 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS4BO75351 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS4BO75351 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS4BO75351 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VPS4BO75351 PRELID3BP11-201ENST00000414230 479 ntBASIC4.79□□□□□ -1.64
VPS4BO75351 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.79□□□□□ -1.64
VPS4BO75351 AC099336.2-201ENST00000422457 254 ntBASIC4.79□□□□□ -1.64
VPS4BO75351 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS4BO75351 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS4BO75351 AC092013.1-201ENST00000438795 332 ntBASIC4.79□□□□□ -1.64
VPS4BO75351 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS4BO75351 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.79□□□□□ -1.64
VPS4BO75351 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS4BO75351 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.79□□□□□ -1.64
VPS4BO75351 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.79□□□□□ -1.64
VPS4BO75351 AC099560.2-201ENST00000457554 255 ntBASIC4.79□□□□□ -1.64
VPS4BO75351 TPT1P7-201ENST00000458300 517 ntBASIC4.79□□□□□ -1.64
VPS4BO75351 RN7SL809P-201ENST00000482040 297 ntBASIC4.79□□□□□ -1.64
VPS4BO75351 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS4BO75351 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS4BO75351 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.79□□□□□ -1.64
VPS4BO75351 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS4BO75351 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS4BO75351 PARP1P2-201ENST00000556806 195 ntBASIC4.79□□□□□ -1.64
VPS4BO75351 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS4BO75351 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS4BO75351 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS4BO75351 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VPS4BO75351 NDUFA8P1-201ENST00000605525 367 ntBASIC4.79□□□□□ -1.64
VPS4BO75351 AC107214.2-201ENST00000608204 634 ntBASIC4.79□□□□□ -1.64
VPS4BO75351 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS4BO75351 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS4BO75351 AC087385.3-201ENST00000620477 187 ntBASIC4.79□□□□□ -1.64
VPS4BO75351 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS4BO75351 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS4BO75351 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS4BO75351 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VPS4BO75351 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VPS4BO75351 AC009643.2-201ENST00000603543 1448 ntBASIC4.79□□□□□ -1.64
VPS4BO75351 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
VPS4BO75351 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS4BO75351 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
VPS4BO75351 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms