Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.81□□□□□ -1.8
SDC3O75056 AC233982.1-201ENST00000451247 436 ntBASIC3.81□□□□□ -1.8
SDC3O75056 DNAJC19P8-201ENST00000452887 259 ntBASIC3.81□□□□□ -1.8
SDC3O75056 PRSS3P4-201ENST00000453323 162 ntBASIC3.81□□□□□ -1.8
SDC3O75056 AC092902.1-201ENST00000486999 259 ntBASIC3.81□□□□□ -1.8
SDC3O75056 AC092045.1-201ENST00000495716 1231 ntBASIC3.81□□□□□ -1.8
SDC3O75056 AC016550.1-201ENST00000505348 785 ntBASIC3.81□□□□□ -1.8
SDC3O75056 HMGN1P11-201ENST00000508668 303 ntBASIC3.81□□□□□ -1.8
SDC3O75056 AC110768.1-201ENST00000509222 400 ntBASIC3.81□□□□□ -1.8
SDC3O75056 AC104619.4-201ENST00000510773 249 ntBASIC3.81□□□□□ -1.8
SDC3O75056 PTGES3P3-201ENST00000511479 482 ntBASIC3.81□□□□□ -1.8
SDC3O75056 MIR2114-201ENST00000516645 80 ntBASIC3.81□□□□□ -1.8
SDC3O75056 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.81□□□□□ -1.8
SDC3O75056 AC087369.1-201ENST00000520775 996 ntBASIC3.81□□□□□ -1.8
SDC3O75056 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
SDC3O75056 CENPUP2-201ENST00000555897 1186 ntBASIC3.81□□□□□ -1.8
SDC3O75056 AL360157.1-201ENST00000565962 87 ntBASIC3.81□□□□□ -1.8
SDC3O75056 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.81□□□□□ -1.8
SDC3O75056 AC091488.1-201ENST00000604239 660 ntBASIC3.81□□□□□ -1.8
SDC3O75056 AC110741.2-201ENST00000605278 268 ntBASIC3.81□□□□□ -1.8
SDC3O75056 AC019176.2-201ENST00000611579 315 ntBASIC3.81□□□□□ -1.8
SDC3O75056 AC092608.3-201ENST00000625017 386 ntBASIC3.81□□□□□ -1.8
SDC3O75056 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.81□□□□□ -1.8
SDC3O75056 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.81□□□□□ -1.8
SDC3O75056 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.81□□□□□ -1.8
SDC3O75056 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.81□□□□□ -1.8
SDC3O75056 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.8□□□□□ -1.8
SDC3O75056 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SDC3O75056 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
SDC3O75056 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.8□□□□□ -1.8
SDC3O75056 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SDC3O75056 U1.1-201ENST00000384101 164 ntBASIC3.8□□□□□ -1.8
SDC3O75056 MIR525-201ENST00000384978 85 ntBASIC3.8□□□□□ -1.8
SDC3O75056 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SDC3O75056 RPL22P22-201ENST00000395439 379 ntBASIC3.8□□□□□ -1.8
SDC3O75056 SNORA11C-201ENST00000408532 129 ntBASIC3.8□□□□□ -1.8
SDC3O75056 RPS29P4-201ENST00000414733 161 ntBASIC3.8□□□□□ -1.8
SDC3O75056 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.8□□□□□ -1.8
SDC3O75056 AL035423.1-201ENST00000420331 213 ntBASIC3.8□□□□□ -1.8
SDC3O75056 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.8□□□□□ -1.8
SDC3O75056 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.8□□□□□ -1.8
SDC3O75056 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.8□□□□□ -1.8
SDC3O75056 AL096803.2-201ENST00000450032 677 ntBASIC3.8□□□□□ -1.8
SDC3O75056 BX276092.4-201ENST00000452056 248 ntBASIC3.8□□□□□ -1.8
SDC3O75056 AC008280.2-201ENST00000455473 307 ntBASIC3.8□□□□□ -1.8
SDC3O75056 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.8□□□□□ -1.8
SDC3O75056 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.8□□□□□ -1.8
SDC3O75056 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.8□□□□□ -1.8
SDC3O75056 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.8□□□□□ -1.8
SDC3O75056 AC104629.1-201ENST00000494226 508 ntBASIC3.8□□□□□ -1.8
SDC3O75056 UBE2CP3-201ENST00000502715 450 ntBASIC3.8□□□□□ -1.8
SDC3O75056 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.8□□□□□ -1.8
SDC3O75056 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.8□□□□□ -1.8
SDC3O75056 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SDC3O75056 AC008885.2-201ENST00000509506 930 ntBASIC3.8□□□□□ -1.8
SDC3O75056 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.8□□□□□ -1.8
SDC3O75056 IGKV2D-19-201ENST00000523346 262 ntBASIC3.8□□□□□ -1.8
SDC3O75056 OR4A12P-201ENST00000530847 918 ntBASIC3.8□□□□□ -1.8
SDC3O75056 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.8□□□□□ -1.8
SDC3O75056 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.8□□□□□ -1.8
SDC3O75056 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SDC3O75056 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.8□□□□□ -1.8
SDC3O75056 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.8□□□□□ -1.8
SDC3O75056 AC244505.7-201ENST00000599675 272 ntBASIC3.8□□□□□ -1.8
SDC3O75056 AL161756.2-201ENST00000604597 246 ntBASIC3.8□□□□□ -1.8
SDC3O75056 AC008759.3-201ENST00000613300 508 ntBASIC3.8□□□□□ -1.8
SDC3O75056 AC253576.2-201ENST00000618815 580 ntBASIC3.8□□□□□ -1.8
SDC3O75056 AL357559.1-201ENST00000622228 274 ntBASIC3.8□□□□□ -1.8
SDC3O75056 C2orf27A-204ENST00000623058 969 ntBASIC3.8□□□□□ -1.8
SDC3O75056 AC006065.5-201ENST00000623427 349 ntBASIC3.8□□□□□ -1.8
SDC3O75056 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.8□□□□□ -1.8
SDC3O75056 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SDC3O75056 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SDC3O75056 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SDC3O75056 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SDC3O75056 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SDC3O75056 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SDC3O75056 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
SDC3O75056 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
SDC3O75056 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.79□□□□□ -1.8
SDC3O75056 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
SDC3O75056 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SDC3O75056 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SDC3O75056 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SDC3O75056 AC007066.1-201ENST00000392902 381 ntBASIC3.79□□□□□ -1.8
SDC3O75056 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SDC3O75056 RNA5SP306-201ENST00000411087 107 ntBASIC3.79□□□□□ -1.8
SDC3O75056 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.79□□□□□ -1.8
SDC3O75056 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.79□□□□□ -1.8
SDC3O75056 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.79□□□□□ -1.8
SDC3O75056 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.79□□□□□ -1.8
SDC3O75056 OR51AB1P-201ENST00000429046 620 ntBASIC3.79□□□□□ -1.8
SDC3O75056 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.79□□□□□ -1.8
SDC3O75056 RPL23AP83-201ENST00000434984 473 ntBASIC3.79□□□□□ -1.8
SDC3O75056 Z74696.2-201ENST00000436514 498 ntBASIC3.79□□□□□ -1.8
SDC3O75056 USP9YP7-201ENST00000436723 430 ntBASIC3.79□□□□□ -1.8
SDC3O75056 AC092170.1-201ENST00000440211 356 ntBASIC3.79□□□□□ -1.8
SDC3O75056 HSFY3P-201ENST00000444242 1191 ntBASIC3.79□□□□□ -1.8
SDC3O75056 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.79□□□□□ -1.8
SDC3O75056 USP9YP32-201ENST00000452432 430 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms