Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.32□□□□□ -1.72
LDB2O43679 TRAV8-5-201ENST00000537369 341 ntBASIC4.32□□□□□ -1.72
LDB2O43679 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.32□□□□□ -1.72
LDB2O43679 AL109766.1-201ENST00000555080 552 ntBASIC4.32□□□□□ -1.72
LDB2O43679 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.32□□□□□ -1.72
LDB2O43679 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.32□□□□□ -1.72
LDB2O43679 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.32□□□□□ -1.72
LDB2O43679 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.32□□□□□ -1.72
LDB2O43679 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.32□□□□□ -1.72
LDB2O43679 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.32□□□□□ -1.72
LDB2O43679 AC124312.6-202ENST00000623624 418 ntBASIC4.32□□□□□ -1.72
LDB2O43679 AF246928.1-201ENST00000623768 87 ntBASIC4.32□□□□□ -1.72
LDB2O43679 AP003072.4-201ENST00000624580 310 ntBASIC4.32□□□□□ -1.72
LDB2O43679 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LDB2O43679 AC140479.6-201ENST00000633535 357 ntBASIC4.32□□□□□ -1.72
LDB2O43679 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
LDB2O43679 AC092079.1-201ENST00000558620 1985 ntBASIC4.32□□□□□ -1.72
LDB2O43679 AC010329.2-201ENST00000595195 2737 ntBASIC4.32□□□□□ -1.72
LDB2O43679 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LDB2O43679 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
LDB2O43679 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
LDB2O43679 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LDB2O43679 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LDB2O43679 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LDB2O43679 DDX18P3-201ENST00000404856 2007 ntBASIC4.31□□□□□ -1.72
LDB2O43679 AC009313.2-201ENST00000417893 1941 ntBASIC4.31□□□□□ -1.72
LDB2O43679 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LDB2O43679 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LDB2O43679 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.31□□□□□ -1.72
LDB2O43679 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LDB2O43679 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LDB2O43679 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LDB2O43679 RNA5SP28-201ENST00000363841 119 ntBASIC4.31□□□□□ -1.72
LDB2O43679 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.31□□□□□ -1.72
LDB2O43679 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
LDB2O43679 Y_RNA.408-201ENST00000383987 102 ntBASIC4.31□□□□□ -1.72
LDB2O43679 Y_RNA.436-201ENST00000384097 102 ntBASIC4.31□□□□□ -1.72
LDB2O43679 BTF3L4P1-201ENST00000413813 468 ntBASIC4.31□□□□□ -1.72
LDB2O43679 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.31□□□□□ -1.72
LDB2O43679 AC234782.4-201ENST00000417646 1048 ntBASIC4.31□□□□□ -1.72
LDB2O43679 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.31□□□□□ -1.72
LDB2O43679 AL022400.1-201ENST00000423946 935 ntBASIC4.31□□□□□ -1.72
LDB2O43679 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.31□□□□□ -1.72
LDB2O43679 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.31□□□□□ -1.72
LDB2O43679 AL157831.1-201ENST00000426134 473 ntBASIC4.31□□□□□ -1.72
LDB2O43679 RPS29P17-201ENST00000430795 166 ntBASIC4.31□□□□□ -1.72
LDB2O43679 PRELID3BP10-201ENST00000431957 584 ntBASIC4.31□□□□□ -1.72
LDB2O43679 AC011998.1-201ENST00000433403 117 ntBASIC4.31□□□□□ -1.72
LDB2O43679 AC098826.1-201ENST00000433943 471 ntBASIC4.31□□□□□ -1.72
LDB2O43679 AL132765.1-201ENST00000434165 553 ntBASIC4.31□□□□□ -1.72
LDB2O43679 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.31□□□□□ -1.72
LDB2O43679 AL353597.2-202ENST00000434901 373 ntBASIC4.31□□□□□ -1.72
LDB2O43679 RPL7P59-201ENST00000447700 943 ntBASIC4.31□□□□□ -1.72
LDB2O43679 AC009961.3-201ENST00000449832 765 ntBASIC4.31□□□□□ -1.72
LDB2O43679 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.31□□□□□ -1.72
LDB2O43679 RPL37P3-201ENST00000456825 293 ntBASIC4.31□□□□□ -1.72
LDB2O43679 RPL23AP24-201ENST00000458203 385 ntBASIC4.31□□□□□ -1.72
LDB2O43679 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.31□□□□□ -1.72
LDB2O43679 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.31□□□□□ -1.72
LDB2O43679 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.31□□□□□ -1.72
LDB2O43679 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.31□□□□□ -1.72
LDB2O43679 AC008885.2-201ENST00000509506 930 ntBASIC4.31□□□□□ -1.72
LDB2O43679 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.31□□□□□ -1.72
LDB2O43679 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.31□□□□□ -1.72
LDB2O43679 AC008494.2-201ENST00000514544 370 ntBASIC4.31□□□□□ -1.72
LDB2O43679 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.31□□□□□ -1.72
LDB2O43679 RN7SKP31-201ENST00000516354 278 ntBASIC4.31□□□□□ -1.72
LDB2O43679 RNU6-885P-201ENST00000516607 104 ntBASIC4.31□□□□□ -1.72
LDB2O43679 HMGB1P19-201ENST00000517578 577 ntBASIC4.31□□□□□ -1.72
LDB2O43679 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.31□□□□□ -1.72
LDB2O43679 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.31□□□□□ -1.72
LDB2O43679 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.31□□□□□ -1.72
LDB2O43679 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.31□□□□□ -1.72
LDB2O43679 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LDB2O43679 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.31□□□□□ -1.72
LDB2O43679 AC006064.5-201ENST00000541782 248 ntBASIC4.31□□□□□ -1.72
LDB2O43679 AC068714.1-201ENST00000559623 800 ntBASIC4.31□□□□□ -1.72
LDB2O43679 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.31□□□□□ -1.72
LDB2O43679 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.31□□□□□ -1.72
LDB2O43679 MTND6P33-201ENST00000571794 183 ntBASIC4.31□□□□□ -1.72
LDB2O43679 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.31□□□□□ -1.72
LDB2O43679 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.31□□□□□ -1.72
LDB2O43679 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.31□□□□□ -1.72
LDB2O43679 AC068790.2-201ENST00000602601 557 ntBASIC4.31□□□□□ -1.72
LDB2O43679 AC103881.1-201ENST00000603476 538 ntBASIC4.31□□□□□ -1.72
LDB2O43679 AC133552.5-201ENST00000604266 540 ntBASIC4.31□□□□□ -1.72
LDB2O43679 AL008729.2-201ENST00000606393 473 ntBASIC4.31□□□□□ -1.72
LDB2O43679 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.31□□□□□ -1.72
LDB2O43679 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LDB2O43679 AC073348.1-201ENST00000623002 331 ntBASIC4.31□□□□□ -1.72
LDB2O43679 AC098679.4-201ENST00000624241 654 ntBASIC4.31□□□□□ -1.72
LDB2O43679 AC091965.5-201ENST00000624785 342 ntBASIC4.31□□□□□ -1.72
LDB2O43679 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.31□□□□□ -1.72
LDB2O43679 AC055839.1-201ENST00000634467 498 ntBASIC4.31□□□□□ -1.72
LDB2O43679 AC008013.2-202ENST00000637965 364 ntBASIC4.31□□□□□ -1.72
LDB2O43679 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
LDB2O43679 AC087359.1-201ENST00000508335 1740 ntBASIC4.31□□□□□ -1.72
LDB2O43679 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.31□□□□□ -1.72
LDB2O43679 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
LDB2O43679 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms