Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.58□□□□□ -1.52
CUX2O14529 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CUX2O14529 AC064859.1-201ENST00000624741 174 ntBASIC5.58□□□□□ -1.52
CUX2O14529 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.57□□□□□ -1.52
CUX2O14529 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CUX2O14529 SCN1A-220ENST00000641603 12506 ntBASIC5.57□□□□□ -1.52
CUX2O14529 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CUX2O14529 Y_RNA.4-201ENST00000362333 112 ntBASIC5.57□□□□□ -1.52
CUX2O14529 Y_RNA.40-201ENST00000362645 93 ntBASIC5.57□□□□□ -1.52
CUX2O14529 RNA5SP229-201ENST00000410809 99 ntBASIC5.57□□□□□ -1.52
CUX2O14529 OR6C64P-201ENST00000419708 825 ntBASIC5.57□□□□□ -1.52
CUX2O14529 AC021205.1-201ENST00000468797 348 ntBASIC5.57□□□□□ -1.52
CUX2O14529 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.57□□□□□ -1.52
CUX2O14529 AC068724.1-201ENST00000487100 792 ntBASIC5.57□□□□□ -1.52
CUX2O14529 HMGB3P14-201ENST00000494195 599 ntBASIC5.57□□□□□ -1.52
CUX2O14529 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.57□□□□□ -1.52
CUX2O14529 AC134882.1-201ENST00000603738 1676 ntBASIC5.57□□□□□ -1.52
CUX2O14529 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CUX2O14529 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CUX2O14529 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CUX2O14529 RNU6-283P-201ENST00000364788 107 ntBASIC5.56□□□□□ -1.52
CUX2O14529 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
CUX2O14529 AC074367.1-201ENST00000438685 1125 ntBASIC5.56□□□□□ -1.52
CUX2O14529 AL357552.1-201ENST00000445254 415 ntBASIC5.56□□□□□ -1.52
CUX2O14529 RPS4XP13-201ENST00000483219 789 ntBASIC5.56□□□□□ -1.52
CUX2O14529 AC108210.2-201ENST00000503681 201 ntBASIC5.56□□□□□ -1.52
CUX2O14529 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.56□□□□□ -1.52
CUX2O14529 AC005798.1-201ENST00000513715 387 ntBASIC5.56□□□□□ -1.52
CUX2O14529 AP000926.4-201ENST00000527351 454 ntBASIC5.56□□□□□ -1.52
CUX2O14529 DUXAP6-201ENST00000553858 601 ntBASIC5.56□□□□□ -1.52
CUX2O14529 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC5.56□□□□□ -1.52
CUX2O14529 AL158062.1-201ENST00000619632 745 ntBASIC5.56□□□□□ -1.52
CUX2O14529 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.56□□□□□ -1.52
CUX2O14529 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CUX2O14529 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CUX2O14529 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CUX2O14529 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CUX2O14529 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CUX2O14529 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CUX2O14529 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CUX2O14529 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CUX2O14529 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.55□□□□□ -1.52
CUX2O14529 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CUX2O14529 AC090971.4-201ENST00000560291 1800 ntBASIC5.55□□□□□ -1.52
CUX2O14529 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.55□□□□□ -1.52
CUX2O14529 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5.55□□□□□ -1.52
CUX2O14529 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.55□□□□□ -1.52
CUX2O14529 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC5.55□□□□□ -1.52
CUX2O14529 RPS4XP2-201ENST00000458402 793 ntBASIC5.55□□□□□ -1.52
CUX2O14529 AC078785.3-201ENST00000476607 425 ntBASIC5.55□□□□□ -1.52
CUX2O14529 TRBV8-1-201ENST00000481590 279 ntBASIC5.55□□□□□ -1.52
CUX2O14529 RNU6-943P-201ENST00000516960 98 ntBASIC5.55□□□□□ -1.52
CUX2O14529 AC087888.1-201ENST00000550884 1254 ntBASIC5.55□□□□□ -1.52
CUX2O14529 MIR2682-201ENST00000580305 110 ntBASIC5.55□□□□□ -1.52
CUX2O14529 AC020914.4-201ENST00000597690 277 ntBASIC5.55□□□□□ -1.52
CUX2O14529 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CUX2O14529 AC012078.1-201ENST00000405035 1646 ntBASIC5.55□□□□□ -1.52
CUX2O14529 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CUX2O14529 HSPE1P8-201ENST00000406997 288 ntBASIC5.54□□□□□ -1.52
CUX2O14529 MRPS18BP2-201ENST00000434310 759 ntBASIC5.54□□□□□ -1.52
CUX2O14529 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.54□□□□□ -1.52
CUX2O14529 GOLGA5P1-201ENST00000507317 980 ntBASIC5.54□□□□□ -1.52
CUX2O14529 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC5.54□□□□□ -1.52
CUX2O14529 AC026333.2-201ENST00000542164 106 ntBASIC5.54□□□□□ -1.52
CUX2O14529 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.54□□□□□ -1.52
CUX2O14529 AL390334.1-201ENST00000556395 450 ntBASIC5.54□□□□□ -1.52
CUX2O14529 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.54□□□□□ -1.52
CUX2O14529 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.54□□□□□ -1.52
CUX2O14529 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC5.54□□□□□ -1.52
CUX2O14529 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.54□□□□□ -1.52
CUX2O14529 AL157817.1-201ENST00000614264 790 ntBASIC5.54□□□□□ -1.52
CUX2O14529 AC022149.2-201ENST00000621061 203 ntBASIC5.54□□□□□ -1.52
CUX2O14529 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CUX2O14529 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CUX2O14529 NCAPGP1-201ENST00000505112 1814 ntBASIC5.54□□□□□ -1.52
CUX2O14529 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CUX2O14529 MIR184-201ENST00000384962 84 ntBASIC5.53□□□□□ -1.52
CUX2O14529 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CUX2O14529 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CUX2O14529 AL513328.1-201ENST00000446460 224 ntBASIC5.53□□□□□ -1.52
CUX2O14529 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.53□□□□□ -1.52
CUX2O14529 RNU4-29P-201ENST00000515943 174 ntBASIC5.53□□□□□ -1.52
CUX2O14529 RNU6-548P-201ENST00000517083 115 ntBASIC5.53□□□□□ -1.52
CUX2O14529 IGKV3-31-201ENST00000523109 329 ntBASIC5.53□□□□□ -1.52
CUX2O14529 OR4C2P-201ENST00000530855 1064 ntBASIC5.53□□□□□ -1.52
CUX2O14529 MTND2P17-201ENST00000550281 688 ntBASIC5.53□□□□□ -1.52
CUX2O14529 AL713998.2-201ENST00000604538 1198 ntBASIC5.53□□□□□ -1.52
CUX2O14529 GMCL1P2-201ENST00000605230 823 ntBASIC5.53□□□□□ -1.52
CUX2O14529 AC026790.2-201ENST00000606282 430 ntBASIC5.53□□□□□ -1.52
CUX2O14529 AC103798.2-201ENST00000624292 632 ntBASIC5.53□□□□□ -1.52
CUX2O14529 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CUX2O14529 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CUX2O14529 ZNF72P-201ENST00000425869 1908 ntBASIC5.53□□□□□ -1.52
CUX2O14529 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC5.53□□□□□ -1.52
CUX2O14529 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CUX2O14529 SNORA71.1-201ENST00000364523 117 ntBASIC5.52□□□□□ -1.53
CUX2O14529 SNORA67.4-201ENST00000384688 142 ntBASIC5.52□□□□□ -1.53
CUX2O14529 ZNF603P-201ENST00000405613 487 ntBASIC5.52□□□□□ -1.53
CUX2O14529 RN7SKP220-201ENST00000410611 288 ntBASIC5.52□□□□□ -1.53
CUX2O14529 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms