Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 RN7SKP244-201ENST00000516513 307 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 AP006245.1-201ENST00000522549 120 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 CIR1P1-201ENST00000524055 1133 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 MTCYBP41-201ENST00000528913 1123 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 AP003717.3-201ENST00000544832 1180 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 UBE2NP1-201ENST00000545592 458 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 MIR4697-201ENST00000582977 78 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 OR2BH1P-201ENST00000608850 864 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 AL121890.3-201ENST00000618494 516 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 AC018926.3-201ENST00000618841 406 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 AC079684.1-201ENST00000621405 437 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 MIR6830-201ENST00000636015 70 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 AC104446.1-201ENST00000613728 1321 ntBASIC2.88□□□□□ -1.95
RBFOX3A6NFN3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 AC021755.1-201ENST00000559747 1447 ntBASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 AC107081.3-201ENST00000612715 2034 ntBASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 MIR148B-201ENST00000362252 99 ntBASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 RNU6-543P-201ENST00000362576 108 ntBASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 RNU6-252P-201ENST00000363232 107 ntBASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 RNU1-132P-201ENST00000364300 164 ntBASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 AP000567.1-201ENST00000406413 156 ntBASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 AL583834.1-201ENST00000406943 343 ntBASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 MIR1250-201ENST00000408098 113 ntBASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 HMGB3P23-201ENST00000414981 585 ntBASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 AL592293.2-201ENST00000422292 996 ntBASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 MTND4P24-201ENST00000424002 397 ntBASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 RPS4XP13-201ENST00000483219 789 ntBASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 AC093663.2-201ENST00000484625 313 ntBASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 AC092185.1-201ENST00000491371 97 ntBASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 RNU2-27P-201ENST00000516185 142 ntBASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 RNA5SP380-201ENST00000517190 98 ntBASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 NAT2-202ENST00000520116 716 ntTSL 3 BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 AC104027.1-201ENST00000521887 300 ntBASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 AC022784.5-201ENST00000522241 437 ntBASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 YPEL5P3-201ENST00000547227 352 ntBASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 PSMB7P1-201ENST00000556349 514 ntBASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 AC007566.2-201ENST00000603642 413 ntBASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 AC112200.1-201ENST00000625015 234 ntBASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 ZNF37BP-203ENST00000452306 1352 ntBASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 AC005261.4-201ENST00000600047 1385 ntBASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
RBFOX3A6NFN3 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC2.86□□□□□ -1.95
RBFOX3A6NFN3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
RBFOX3A6NFN3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RBFOX3A6NFN3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.86□□□□□ -1.95
RBFOX3A6NFN3 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
RBFOX3A6NFN3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.86□□□□□ -1.95
RBFOX3A6NFN3 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RBFOX3A6NFN3 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RBFOX3A6NFN3 RNU6-600P-201ENST00000362524 99 ntBASIC2.86□□□□□ -1.95
RBFOX3A6NFN3 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RBFOX3A6NFN3 OR6C69P-201ENST00000394268 893 ntBASIC2.86□□□□□ -1.95
RBFOX3A6NFN3 AL161909.1-201ENST00000397390 712 ntBASIC2.86□□□□□ -1.95
RBFOX3A6NFN3 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms