Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 NPM1P24-201ENST00000428039 894 ntBASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 AC093155.1-201ENST00000440164 826 ntBASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 TCEA1P3-201ENST00000443005 880 ntBASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 H2AFZP5-201ENST00000446960 382 ntBASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 ZNF114P1-201ENST00000453500 292 ntBASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 MTCO3P11-201ENST00000455103 774 ntBASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 PNPLA4P1-201ENST00000458328 305 ntBASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 RNU6-405P-201ENST00000516637 110 ntBASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 AC009643.1-201ENST00000532030 391 ntBASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 RN7SL690P-201ENST00000582087 240 ntBASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 MIR4512-201ENST00000583257 77 ntBASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 MTCYBP22-201ENST00000603788 447 ntBASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 AC025594.3-201ENST00000613068 790 ntBASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 AL353726.1-201ENST00000614041 1000 ntBASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 AL121873.1-201ENST00000616013 524 ntBASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 AP000648.2-201ENST00000624182 404 ntBASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 AC108467.2-201ENST00000617640 1597 ntBASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 AP001642.1-201ENST00000624727 2117 ntBASIC5.5□□□□□ -1.53
CTDP1Q9Y5B0 DCAF13P3-201ENST00000561147 1334 ntBASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 AC009643.2-201ENST00000603543 1448 ntBASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 AC011755.1-201ENST00000623763 2049 ntBASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 IGKV7-3-201ENST00000357453 298 ntBASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 Y_RNA.41-201ENST00000362646 102 ntBASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 AL049697.2-201ENST00000403708 294 ntBASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 AP001324.1-201ENST00000428553 399 ntBASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 TRIM60P18-201ENST00000441518 828 ntBASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 RPL5P30-201ENST00000465511 891 ntBASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 AC010683.1-201ENST00000473673 378 ntBASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 BNIP3P41-201ENST00000503774 571 ntBASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 RNU6-416P-201ENST00000516265 103 ntBASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 AP002812.4-201ENST00000532139 286 ntBASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 AC016957.1-201ENST00000534895 309 ntBASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 CCNG2P1-201ENST00000549521 1000 ntBASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 AC069061.3-201ENST00000582254 823 ntBASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 MIR548Y-201ENST00000582739 110 ntBASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 AC110743.1-201ENST00000584870 478 ntBASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 AC083899.3-201ENST00000603413 594 ntBASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 AC099063.3-201ENST00000642066 185 ntBASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 AC091046.3-201ENST00000631455 1574 ntBASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.49□□□□□ -1.53
CTDP1Q9Y5B0 CCT8P1-201ENST00000413611 1657 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms