Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
RCL1Q9Y2P8 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
RCL1Q9Y2P8 AC025263.3-201ENST00000622965 1396 ntBASIC3.09□□□□□ -1.92
RCL1Q9Y2P8 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.92
RCL1Q9Y2P8 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
RCL1Q9Y2P8 RIOK3P1-201ENST00000418778 1528 ntBASIC3.09□□□□□ -1.92
RCL1Q9Y2P8 ZNF734P-201ENST00000419494 1534 ntBASIC3.09□□□□□ -1.92
RCL1Q9Y2P8 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 MFSD8-236ENST00000641509 4050 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 MT-TC-201ENST00000387405 66 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 AC011933.1-201ENST00000413334 321 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 UBE2V1P9-201ENST00000414760 368 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 AC007390.1-201ENST00000415722 356 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 PAICSP7-201ENST00000419829 962 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 VN1R42P-201ENST00000424651 344 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 RPL21P66-201ENST00000426566 466 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 CNOT7P1-201ENST00000429006 852 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 AC010881.1-201ENST00000433830 235 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 AL034418.1-201ENST00000448675 860 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 HMGN3P1-201ENST00000453847 193 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 RPS15AP1-201ENST00000457423 391 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 snoU13.1-201ENST00000459157 104 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 snoU13.3-201ENST00000459441 104 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 AC116533.1-201ENST00000459748 321 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 AK3P4-201ENST00000504283 583 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 HMGB3P15-201ENST00000507326 574 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 RAC1P2-201ENST00000511164 579 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 SETP12-201ENST00000514068 805 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 RN7SKP60-201ENST00000516985 239 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 IGKV2D-36-201ENST00000518643 226 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 IGKV2D-19-201ENST00000523346 262 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 AC092470.1-201ENST00000546187 132 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 AC119501.1-201ENST00000603646 475 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 BNIP3P4-201ENST00000604946 565 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 AC079791.1-201ENST00000605356 973 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 AC003001.2-201ENST00000616294 831 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 AL121890.3-201ENST00000618494 516 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 AP000346.3-201ENST00000622821 210 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 U6.98-201ENST00000637157 84 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 AC132825.7-201ENST00000638744 335 ntBASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.08□□□□□ -1.92
RCL1Q9Y2P8 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
RCL1Q9Y2P8 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.07□□□□□ -1.92
RCL1Q9Y2P8 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
RCL1Q9Y2P8 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.07□□□□□ -1.92
RCL1Q9Y2P8 SNORD56.4-201ENST00000363883 71 ntBASIC3.07□□□□□ -1.92
RCL1Q9Y2P8 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.07□□□□□ -1.92
RCL1Q9Y2P8 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RCL1Q9Y2P8 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RCL1Q9Y2P8 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RCL1Q9Y2P8 U1.1-201ENST00000384101 164 ntBASIC3.07□□□□□ -1.92
RCL1Q9Y2P8 RNU6-1226P-201ENST00000384317 107 ntBASIC3.07□□□□□ -1.92
RCL1Q9Y2P8 AL136116.1-201ENST00000403591 381 ntBASIC3.07□□□□□ -1.92
RCL1Q9Y2P8 AL159169.1-201ENST00000421119 127 ntBASIC3.07□□□□□ -1.92
RCL1Q9Y2P8 MTCO1P43-201ENST00000431831 488 ntBASIC3.07□□□□□ -1.92
RCL1Q9Y2P8 MTCO3P43-201ENST00000440974 771 ntBASIC3.07□□□□□ -1.92
RCL1Q9Y2P8 TXNP1-201ENST00000441872 371 ntBASIC3.07□□□□□ -1.92
RCL1Q9Y2P8 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.07□□□□□ -1.92
RCL1Q9Y2P8 RPS29P33-201ENST00000456717 146 ntBASIC3.07□□□□□ -1.92
RCL1Q9Y2P8 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.07□□□□□ -1.92
RCL1Q9Y2P8 HMGN2P16-201ENST00000456802 261 ntBASIC3.07□□□□□ -1.92
RCL1Q9Y2P8 RPL23AP14-201ENST00000468281 468 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms