Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 OR4A15-201ENST00000314706 1035 ntBASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 RNU1-75P-201ENST00000347264 129 ntBASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 AP002088.1-201ENST00000382740 395 ntBASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 MIR142-201ENST00000384835 87 ntBASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 AL136116.1-201ENST00000403591 381 ntBASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 PTGES3P2-201ENST00000407942 482 ntBASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 RNA5SP293-201ENST00000410527 113 ntBASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 RNU4-27P-201ENST00000410889 139 ntBASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 VTA1P1-201ENST00000414044 866 ntBASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 MTND2P15-201ENST00000418575 892 ntBASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 SAGE2P-201ENST00000420011 2126 ntBASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 AL606495.1-201ENST00000422100 813 ntBASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 AC006989.1-201ENST00000427212 131 ntBASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 AC005189.1-201ENST00000431286 310 ntBASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 AL512661.1-201ENST00000434586 1253 ntBASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 RPL7P29-201ENST00000437151 728 ntBASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 AL031663.1-201ENST00000437445 219 ntBASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 RPS29P7-201ENST00000439662 171 ntBASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 AL161747.1-201ENST00000480068 358 ntBASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 AC111193.1-201ENST00000504097 155 ntBASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 TXNP6-201ENST00000510190 310 ntBASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 PHBP14-201ENST00000512887 367 ntBASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 AC093853.1-201ENST00000515689 483 ntBASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 OR4C2P-201ENST00000530855 1064 ntBASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 AC106734.1-201ENST00000568646 663 ntBASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 AC087499.8-201ENST00000578406 226 ntBASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 AL049634.3-201ENST00000604968 457 ntBASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 RNU1-30P-201ENST00000606575 163 ntBASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 AC079684.1-201ENST00000621405 437 ntBASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.36□□□□□ -1.87
TRAPPC4Q9Y296 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 AC025125.1-201ENST00000624743 1922 ntBASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 AL161912.2-201ENST00000565707 3007 ntBASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 RNU6-805P-201ENST00000365643 106 ntBASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 RNU6-1005P-201ENST00000384519 107 ntBASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 AL445189.1-201ENST00000405722 338 ntBASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 RN7SKP159-201ENST00000410657 292 ntBASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 UBE2V1P11-201ENST00000411559 285 ntBASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 AL049610.1-201ENST00000423374 372 ntBASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 ARF4P2-201ENST00000430209 526 ntBASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 AL158071.1-201ENST00000430315 461 ntBASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 BX679664.1-201ENST00000434429 253 ntBASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 UBDP1-202ENST00000457888 382 ntBASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 SNORD108-201ENST00000459332 71 ntBASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 RN7SL330P-201ENST00000469709 307 ntBASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 RPS4XP22-201ENST00000480755 780 ntBASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 FCF1P3-201ENST00000496394 590 ntBASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 AC010285.3-201ENST00000511668 676 ntBASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 RNA5SP208-201ENST00000516156 78 ntBASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 SNORA26.10-201ENST00000516427 141 ntBASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 OR5AK3P-201ENST00000527486 1297 ntBASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 AC008011.1-201ENST00000545989 227 ntBASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 AC005972.3-201ENST00000606304 481 ntBASIC3.35□□□□□ -1.87
TRAPPC4Q9Y296 AC018816.2-201ENST00000621460 353 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms